Strain identifier

BacDive ID: 15143

Type strain: No

Species: Streptomyces griseus

Strain Designation: 7699

Strain history: KCC S-0339 <-- IFO 12736 <-- SAJ <-- ISP 5135 <-- INA 7699.

NCBI tax ID(s): 1884 (species)

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General

@ref: 9337

BacDive-ID: 15143

DSM-Number: 40135

keywords: 16S sequence, Bacteria

description: Streptomyces griseus 7699 is a bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 1884
  • Matching level: species

strain history

@refhistory
9337<- NRRL <- G. F. Gauze, INA
67770KCC S-0339 <-- IFO 12736 <-- SAJ <-- ISP 5135 <-- INA 7699.

doi: 10.13145/bacdive15143.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces griseus
  • full scientific name: Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Actinomyces globisporus subsp. flavofuscus
    20215Actinomyces acrimycini
    20215Actinomyces setonii
    20215Actinomyces fimicarius
    20215Streptomyces setonii
    20215Streptomyces fimicarius
    20215Streptomyces globisporus subsp. flavofuscus
    20215Streptomyces baarnensis
    20215Streptomyces acrimycini
    20215Actinomyces griseus
    20215Streptomyces erumpens
    20215Streptomyces argenteolus
    20215Streptomyces flavofuscus
    20215Streptomyces caviscabies

@ref: 9337

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces griseus subsp. griseus

full scientific name: Streptomyces griseus subsp. griseus (Krainsky 1914) Pridham 1970

strain designation: 7699

type strain: no

Culture and growth conditions

culture medium

  • @ref: 9337
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperature
18540positiveoptimum28
9337positivegrowth28
67770positivegrowth28

Physiology and metabolism

halophily

  • @ref: 18540
  • salt: NaCl
  • growth: positive
  • tested relation: maximum
  • concentration: 2.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
1854017234glucose+
1854022599arabinose+/-
1854017992sucrose-
1854018222xylose-
1854017268myo-inositol-
1854029864mannitol+
1854028757fructose+
1854026546rhamnose+
1854016634raffinose-
1854062968cellulose-
683685291gelatin+hydrolysis
6836827897tryptophan-energy source
6836816199urea+hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine+hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6836815688acetoinyes
6836835581indoleno
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin+
6836835581indole-

enzymes

@refvalueactivityec
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease+3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase-3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGEL
18540-+----+--++

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
9337soilKara-KumTurkmenistanTKMAsia
67770Soil

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

@refbiosafety levelbiosafety level commentpathogenicity plant
185401German classification
93371Risk group (German classification)yes

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces acrimycini gene for 16S rRNA, partial sequence, strain: NBRC 12736AB1841101455nuccore1884
20218Streptomyces acrimycini strain DSM 40135 16S ribosomal RNA gene, partial sequenceGU383166780nuccore1884
124043Streptomyces acrimycini gene for 16S ribosomal RNA, partial sequence, strain: JCM 4339.D44060121nuccore1884

External links

@ref: 9337

culture collection no.: DSM 40135, ATCC 19720, ATCC 19885, CBS 459.68, ETH 24207, IFO 12736, INA 7699, ISP 5135, KCC S-0339, NBRC 12736, NRRL B-2565, RIA 1001, JCM 4339, BCRC 12220, CECT 3122, CGMCC 4.1673, KCTC 9679, LMG 21798, NBIMCC 3326, VKM Ac-769

straininfo link

  • @ref: 84247
  • straininfo: 45643

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9337Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40135)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40135
18540Wink, J.http://www.dsmz.de/microorganisms/wink_pdf/DSM40135.pdfCompendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68368Automatically annotated from API 20E
84247Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID45643.1StrainInfo: A central database for resolving microbial strain identifiers
124043Dr. Isabel Schober, Dr. Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy