Strain identifier
version 8.1 (current version)
General
@ref: 55921
BacDive-ID: 151242
keywords: Bacteria
description: Brevundimonas diminuta CCUG 43529 is a bacterium that was isolated from Human wound.
NCBI tax id
- NCBI tax id: 293
- Matching level: species
doi: 10.13145/bacdive151242.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Caulobacterales
- family: Caulobacteraceae
- genus: Brevundimonas
- species: Brevundimonas diminuta
- full scientific name: Brevundimonas diminuta (Leifson and Hugh 1954) Segers et al. 1994
synonyms
- @ref: 20215
- synonym: Pseudomonas diminuta
@ref: 55921
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Caulobacterales
family: Caulobacteraceae
genus: Brevundimonas
species: Brevundimonas diminuta
type strain: no
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | - | assimilation |
| 68369 | 17128 | adipate | - | assimilation |
| 68369 | 27689 | decanoate | + | assimilation |
| 68369 | 24265 | gluconate | - | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | - | assimilation |
| 68369 | 16024 | D-mannose | - | assimilation |
| 68369 | 30849 | L-arabinose | - | assimilation |
| 68369 | 17634 | D-glucose | - | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | - | hydrolysis |
| 68369 | 29016 | arginine | - | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | - | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | - | 3.5.1.5 |
| 68369 | arginine dihydrolase | - | 3.5.3.6 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 55921 C14:0 0.9 14 55921 C15:0 3.3 15 55921 C16:0 20 16 55921 C17:0 2.5 17 55921 C18:0 0.5 18 55921 C12:0 3OH 1.4 13.455 55921 C13:0 ISO 2OH 1.5 13.814 55921 C15:1 ω8c 0.5 14.792 55921 C16:1 ω7c 1.7 15.819 55921 C17:1 ω6c 1.4 16.862 55921 C17:1 ω8c 2.1 16.792 55921 C18:1 ω7c /12t/9t 53.5 17.824 55921 C19:0 CYCLO ω8c 2.8 18.9 55921 C20:2 ω6,9c 0.8 19.735 55921 Unidentified 0.7 14.933 55921 Unidentified 2.1 16.302 55921 Unidentified 0.3 16.94 55921 Unidentified 1 18.082 55921 Unidentified 2.6 18.147 55921 Unidentified 0.3 18.791 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55921 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 55921
- sample type: Human wound
- sampling date: 2000-04-11
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Other | #Wound |
External links
@ref: 55921
culture collection no.: CCUG 43529
straininfo link
- @ref: 105400
- straininfo: 109649
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 55921 | Curators of the CCUG | https://www.ccug.se/strain?id=43529 | Culture Collection University of Gothenburg (CCUG) (CCUG 43529) | |
| 68369 | Automatically annotated from API 20NE | |||
| 105400 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID109649.1 |