Strain identifier
version 8.1 (current version)
General
@ref: 55840
BacDive-ID: 151171
keywords: Bacteria
description: Escherichia coli CCUG 43402 is a bacterium that was isolated from Human urine.
NCBI tax id
- NCBI tax id: 562
- Matching level: species
doi: 10.13145/bacdive151171.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Escherichia
- species: Escherichia coli
- full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus coli
@ref: 55840
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Escherichia
species: Escherichia coli
type strain: no
Physiology and metabolism
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 55840 C12:0 3.4 12 55840 C14:0 10.3 14 55840 C15:0 1 15 55840 C16:0 37 16 55840 C18:0 0.6 18 55840 C14:0 3OH/C16:1 ISO I 7.1 15.485 55840 C16:1 ω7c 10.4 15.819 55840 C17:0 CYCLO 15.8 16.888 55840 C18:1 ω7c /12t/9t 10.2 17.824 55840 C19:0 CYCLO ω8c 2.1 18.9 55840 Unidentified 0.9 14.491 55840 Unidentified 1.2 17.703 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
- @ref: 55840
- sample type: Human urine
- sampling date: 2000-03-01
- geographic location: Gävle
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body Product | #Fluids | #Urine |
External links
@ref: 55840
culture collection no.: CCUG 43402
straininfo link
- @ref: 105336
- straininfo: 109580
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 55840 | Curators of the CCUG | https://www.ccug.se/strain?id=43402 | Culture Collection University of Gothenburg (CCUG) (CCUG 43402) | |
| 105336 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID109580.1 |