Strain identifier
BacDive ID: 1511
Type strain:
Species: Jeotgalibacillus alimentarius
Strain Designation: YKJ-13
Strain history: CIP <- 2002, JCM <- YH Park: strain YKJ-13
NCBI tax ID(s): 135826 (species)
General
@ref: 7754
BacDive-ID: 1511
DSM-Number: 18867
keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, spore-forming, mesophilic, Gram-variable, motile, rod-shaped, colony-forming, pigmented
description: Jeotgalibacillus alimentarius YKJ-13 is a facultative anaerobe, spore-forming, mesophilic bacterium that forms irregular colonies and has a orange-yellow pigmentation.
NCBI tax id
- NCBI tax id: 135826
- Matching level: species
strain history
@ref | history |
---|---|
7754 | <- CIP <- Y.-H. Park; YKJ-13 |
67770 | Y.-H. Park YKJ-13. |
116238 | CIP <- 2002, JCM <- YH Park: strain YKJ-13 |
doi: 10.13145/bacdive1511.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Caryophanaceae
- genus: Jeotgalibacillus
- species: Jeotgalibacillus alimentarius
- full scientific name: Jeotgalibacillus alimentarius Yoon et al. 2001
@ref: 7754
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Caryophanaceae
genus: Jeotgalibacillus
species: Jeotgalibacillus alimentarius
full scientific name: Jeotgalibacillus alimentarius Yoon et al. 2001
strain designation: YKJ-13
type strain: yes
Morphology
cell morphology
@ref | gram stain | cell length | cell width | cell shape | motility | flagellum arrangement | confidence |
---|---|---|---|---|---|---|---|
23065 | variable | 1.0-1.2 µm | 2.0-4-0 µm | rod-shaped | yes | peritrichous | |
69480 | yes | 95.95 | |||||
69480 | positive | 100 | |||||
116238 | positive | rod-shaped | no |
colony morphology
@ref | colony color | colony shape | medium used |
---|---|---|---|
23065 | orange-yellow | irregular | marine agar |
116238 |
pigmentation
- @ref: 23065
- production: yes
- color: orange-yellow
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
7754 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | yes | https://mediadive.dsmz.de/medium/514 | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
23065 | Marine agar (MA) | yes | ||
33775 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
116238 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
7754 | positive | growth | 30 | mesophilic |
23065 | positive | growth | 10.0 | psychrophilic |
23065 | positive | growth | 45.0 | thermophilic |
23065 | no | growth | 4.0 | psychrophilic |
23065 | no | growth | 50.0 | thermophilic |
23065 | positive | growth | 30.0 | mesophilic |
23065 | positive | growth | 37.0 | mesophilic |
23065 | maximum | 45.0-50.0 | thermophilic | |
23065 | positive | optimum | 30.0-35.0 | mesophilic |
33775 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
116238 | positive | growth | 22-45 | |
116238 | no | growth | 10 | psychrophilic |
116238 | no | growth | 55 | thermophilic |
culture pH
@ref | ability | type | pH |
---|---|---|---|
23065 | positive | optimum | 7.0-8.0 |
23065 | no | growth | 6.0 |
116238 | no | growth | 6 |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
23065 | facultative anaerobe |
116238 | facultative anaerobe |
spore formation
@ref | spore description | type of spore | spore formation | confidence |
---|---|---|---|---|
23065 | round,subterminal or terminal,in swollen sporangia | endospore | yes | |
69481 | yes | 100 | ||
69480 | yes | 99.746 |
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
23065 | NaCl | positive | growth | 19.0 % |
23065 | NaCl | positive | growth | 20.0 % |
23065 | NaCl | no | growth | 0.0 % |
23065 | NaCl | positive | growth | 7.0 % |
23065 | NaCl | positive | growth | 10.0 % |
23065 | NaCl | no | growth | 21.0 % |
116238 | NaCl | positive | growth | 0-10 % |
murein
- @ref: 23065
- murein short key: A11
- type: A1alpha L-Lys-direct
observation
- @ref: 67770
- observation: quinones: MK-7, MK-8
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
23065 | 15963 | ribitol | - | builds acid from |
23065 | 17057 | cellobiose | - | builds acid from |
23065 | 16024 | D-mannose | - | builds acid from |
23065 | 17924 | D-sorbitol | - | builds acid from |
23065 | 65327 | D-xylose | - | builds acid from |
23065 | 30849 | L-arabinose | - | builds acid from |
23065 | 62345 | L-rhamnose | - | builds acid from |
23065 | 17716 | lactose | - | builds acid from |
23065 | 17268 | myo-inositol | - | builds acid from |
23065 | 17164 | stachyose | - | builds acid from |
23065 | 17368 | hypoxanthine | - | hydrolysis |
23065 | 28017 | starch | - | hydrolysis |
23065 | 18186 | tyrosine | - | hydrolysis |
23065 | 16199 | urea | - | hydrolysis |
23065 | 15318 | xanthine | - | hydrolysis |
23065 | 15824 | D-fructose | + | builds acid from |
23065 | 12936 | D-galactose | + | builds acid from |
23065 | 17634 | D-glucose | + | builds acid from |
23065 | 16899 | D-mannitol | + | builds acid from |
23065 | 6731 | melezitose | + | builds acid from |
23065 | 16634 | raffinose | + | builds acid from |
23065 | 16988 | D-ribose | + | builds acid from |
23065 | 16551 | D-trehalose | + | builds acid from |
23065 | 17306 | maltose | + | builds acid from |
23065 | 28053 | melibiose | + | builds acid from |
23065 | 17992 | sucrose | + | builds acid from |
23065 | casein | + | hydrolysis | |
23065 | 4853 | esculin | + | hydrolysis |
23065 | 5291 | gelatin | + | hydrolysis |
23065 | 53426 | tween 80 | + | hydrolysis |
23065 | 17632 | nitrate | + | reduction |
68371 | Potassium 5-ketogluconate | - | builds acid from | |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | 24265 | gluconate | - | builds acid from |
68371 | 18403 | L-arabitol | - | builds acid from |
68371 | 18333 | D-arabitol | - | builds acid from |
68371 | 18287 | L-fucose | - | builds acid from |
68371 | 28847 | D-fucose | - | builds acid from |
68371 | 16443 | D-tagatose | - | builds acid from |
68371 | 62318 | D-lyxose | - | builds acid from |
68371 | 32528 | turanose | - | builds acid from |
68371 | 28066 | gentiobiose | - | builds acid from |
68371 | 17151 | xylitol | - | builds acid from |
68371 | 28087 | glycogen | + | builds acid from |
68371 | 28017 | starch | - | builds acid from |
68371 | 16634 | raffinose | - | builds acid from |
68371 | 6731 | melezitose | - | builds acid from |
68371 | 15443 | inulin | - | builds acid from |
68371 | 17992 | sucrose | - | builds acid from |
68371 | 28053 | melibiose | - | builds acid from |
68371 | 17716 | lactose | - | builds acid from |
68371 | 17814 | salicin | - | builds acid from |
68371 | 4853 | esculin | - | builds acid from |
68371 | 18305 | arbutin | - | builds acid from |
68371 | 27613 | amygdalin | - | builds acid from |
68371 | 59640 | N-acetylglucosamine | - | builds acid from |
68371 | 320061 | methyl alpha-D-glucopyranoside | - | builds acid from |
68371 | 43943 | methyl alpha-D-mannoside | - | builds acid from |
68371 | 17924 | D-sorbitol | - | builds acid from |
68371 | 17268 | myo-inositol | - | builds acid from |
68371 | 16813 | galactitol | - | builds acid from |
68371 | 62345 | L-rhamnose | - | builds acid from |
68371 | 17266 | L-sorbose | - | builds acid from |
68371 | 16024 | D-mannose | - | builds acid from |
68371 | 12936 | D-galactose | - | builds acid from |
68371 | 74863 | methyl beta-D-xylopyranoside | - | builds acid from |
68371 | 15963 | ribitol | - | builds acid from |
68371 | 65328 | L-xylose | - | builds acid from |
68371 | 65327 | D-xylose | - | builds acid from |
68371 | 16988 | D-ribose | - | builds acid from |
68371 | 30849 | L-arabinose | - | builds acid from |
68371 | 17108 | D-arabinose | - | builds acid from |
68371 | 17113 | erythritol | - | builds acid from |
68371 | 17754 | glycerol | - | builds acid from |
116238 | 16947 | citrate | - | carbon source |
116238 | 4853 | esculin | - | hydrolysis |
116238 | 606565 | hippurate | - | hydrolysis |
116238 | 17632 | nitrate | + | reduction |
116238 | 16301 | nitrite | - | reduction |
116238 | 17632 | nitrate | - | respiration |
metabolite production
- @ref: 116238
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | methylred-test |
---|---|---|---|---|
116238 | 15688 | acetoin | - | |
116238 | 17234 | glucose | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
23065 | catalase | + | 1.11.1.6 |
23065 | cytochrome oxidase | + | 1.9.3.1 |
23065 | urease | - | 3.5.1.5 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | beta-galactosidase | + | 3.2.1.23 |
68382 | alpha-galactosidase | + | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | acid phosphatase | - | 3.1.3.2 |
68382 | alpha-chymotrypsin | + | 3.4.21.1 |
68382 | trypsin | + | 3.4.21.4 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | valine arylamidase | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | lipase (C 14) | - | |
68382 | esterase lipase (C 8) | + | |
68382 | esterase (C 4) | + | |
68382 | alkaline phosphatase | + | 3.1.3.1 |
116238 | oxidase | - | |
116238 | beta-galactosidase | + | 3.2.1.23 |
116238 | alcohol dehydrogenase | - | 1.1.1.1 |
116238 | gelatinase | + | |
116238 | amylase | + | |
116238 | DNase | - | |
116238 | caseinase | + | 3.4.21.50 |
116238 | catalase | + | 1.11.1.6 |
116238 | tween esterase | + | |
116238 | gamma-glutamyltransferase | - | 2.3.2.2 |
116238 | lecithinase | + | |
116238 | lipase | - | |
116238 | lysine decarboxylase | - | 4.1.1.18 |
116238 | ornithine decarboxylase | - | 4.1.1.17 |
116238 | urease | - | 3.5.1.5 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
116238 | - | + | + | + | - | + | - | - | + | + | - | + | + | + | - | + | - | - | - | - |
API 50CHac
@ref | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
116238 | - | - | - | - | - | - | - | - | - | - | +/- | +/- | - | - | - | - | - | +/- | - | - | - | - | - | - | - | - | +/- | +/- | - | - | - | +/- | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
116238 | - | - | - | - | - | - | + | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | + | - | - | - | - | + | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | + | - | + | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | country | origin.country | continent | enrichment culture | enrichment culture temperature |
---|---|---|---|---|---|---|
7754 | traditional fermented seafood (jeotgal) | Republic of Korea | KOR | Asia | ||
23065 | jeotgal (traditional Korean fermented seafood) | marine agar (Difco) | 30.0 | |||
67770 | Jeotgal, Korean traditional fermented seafood | Republic of Korea | KOR | Asia | ||
116238 | Food, Jeotgal, fermented seafood | Republic of Korea | KOR | Asia |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Food production | #Seafood |
#Engineered | #Food production | #Fermented |
taxonmaps
- @ref: 69479
- File name: preview.99_2833.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_1504;97_1795;98_2194;99_2833&stattab=map
- Last taxonomy: Jeotgalibacillus
- 16S sequence: AF281158
- Sequence Identity:
- Total samples: 1326
- soil counts: 48
- aquatic counts: 234
- animal counts: 1026
- plant counts: 18
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
7754 | 1 | Risk group (German classification) |
116238 | 1 | Risk group (French classification) |
Sequence information
16S sequences
- @ref: 7754
- description: Bacillus kangii 16S ribosomal RNA gene, partial sequence
- accession: AF281158
- length: 1508
- database: ena
- NCBI tax ID: 135826
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Jeotgalibacillus alimentarius YKJ-13 | 135826.4 | wgs | patric | 135826 |
66792 | Jeotgalibacillus alimentarius YKJ-13 | 2630968752 | draft | img | 135826 |
67770 | Jeotgalibacillus alimentarius YKJ-13 | GCA_000829445 | contig | ncbi | 135826 |
GC content
@ref | GC-content | method |
---|---|---|
7754 | 44 | |
23065 | 44.0 | high performance liquid chromatography (HPLC) |
67770 | 44 | high performance liquid chromatography (HPLC) |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | yes | 100 | no |
motile | yes | 92.785 | yes |
gram-positive | yes | 87.639 | yes |
anaerobic | no | 98.398 | yes |
halophile | yes | 86.114 | yes |
spore-forming | yes | 94.19 | yes |
thermophile | no | 97.633 | no |
glucose-util | yes | 91.049 | no |
flagellated | yes | 88.161 | no |
aerobic | yes | 94.18 | no |
glucose-ferment | no | 90.76 | no |
External links
@ref: 7754
culture collection no.: DSM 18867, CIP 107405, JCM 10872, KCCM 80002, CCM 7134, KCTC 13914
straininfo link
- @ref: 71157
- straininfo: 100700
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 11760951 | Jeotgalibacillus alimentarius gen. nov., sp. nov., a novel bacterium isolated from jeotgal with L-lysine in the cell wall, and reclassification of Bacillus marinus Ruger 1983 . as mMrinibacillus marinus gen nov., comb. nov. | Yoon JH, Weiss N, Lee KC, Lee IS, Kang KH, Park YH | Int J Syst Evol Microbiol | 10.1099/00207713-51-6-2087 | 2001 | Bacillus/chemistry/*classification/genetics/isolation & purification/physiology, Culture Media, DNA, Ribosomal/genetics, Fermentation, Korea, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Seafood/*microbiology, Sequence Analysis, DNA | Cultivation |
Phylogeny | 19643870 | Jeotgalibacillus salarius sp. nov., isolated from a marine saltern, and reclassification of Marinibacillus marinus and Marinibacillus campisalis as Jeotgalibacillus marinus comb. nov. and Jeotgalibacillus campisalis comb. nov., respectively. | Yoon JH, Kang SJ, Schumann P, Oh TK | Int J Syst Evol Microbiol | 10.1099/ijs.0.008318-0 | 2009 | Bacillales/*classification/genetics/*isolation & purification/metabolism, Base Composition, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/chemistry/metabolism, Geologic Sediments/*microbiology, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology | Metabolism |
Phylogeny | 23064349 | Domibacillus robiginosus gen. nov., sp. nov., isolated from a pharmaceutical clean room. | Seiler H, Wenning M, Scherer S | Int J Syst Evol Microbiol | 10.1099/ijs.0.044396-0 | 2012 | Bacillaceae/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, *Environment, Controlled, Fatty Acids/analysis, Molecular Sequence Data, Peptidoglycan/analysis, Phospholipids/analysis, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Genetics |
Phylogeny | 25862385 | Isolation of Jeotgalibacillus malaysiensis sp. nov. from a sandy beach, and emended description of the genus Jeotgalibacillus. | Yaakop AS, Chan KG, Ee R, Kahar UM, Kon WC, Goh KM | Int J Syst Evol Microbiol | 10.1099/ijs.0.000242 | 2015 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Malaysia, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, Pigmentation, Planococcaceae/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistry | Genetics |
Genetics | 26494670 | Draft Genome Sequence of Yellow Pigmented Jeotgalibacillus alimentarius JY-13T, the First Halophile Strain of the Genus Jeotgalibacillus. | Yaakop AS, Chan KG, Gan HM, Goh KM | Genome Announc | 10.1128/genomeA.01224-15 | 2015 |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
7754 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18867) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-18867 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
23065 | J. H. Yoon,N. Weiss,K. C. Lee,I. S. Lee,K. H. Kang,Y. H. Park | 10.1099/00207713-51-6-2087 | Jeotgalibacillus alimentarius gen. nov., sp. nov., a novel bacterium isolated from jeotgal with L-lysine in the cell wall, and reclassification of Bacillus marinus Rüger 1983 . as mMrinibacillus marinus gen nov., comb. nov. | IJSEM 51: 2087-2093 2001 | 11760951 | |
33775 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/4836 | ||||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68371 | Automatically annotated from API 50CH acid | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
71157 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID100700.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
116238 | Curators of the CIP | Collection of Institut Pasteur (CIP 107405) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107405 |