Strain identifier

BacDive ID: 150954

Type strain: No

Species: Capnocytophaga canimorsus

NCBI tax ID(s): 28188 (species)

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General

@ref: 55577

BacDive-ID: 150954

keywords: Bacteria, microaerophile, mesophilic

description: Capnocytophaga canimorsus CCUG 42839 is a microaerophile, mesophilic bacterium that was isolated from Human wound,dog bite.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive150954.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 55577

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Culture and growth conditions

culture temp

  • @ref: 55577
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 55577
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    55577C14:01.214
    55577C16:06.216
    55577C18:0118
    55577C13:0 iso0.412.612
    55577C15:0 ANTEISO2.814.711
    55577C15:0 ISO52.614.621
    55577C15:0 ISO 3OH2.416.135
    55577C16:0 3OH3.917.52
    55577C16:0 iso0.915.626
    55577C17:0 iso1.516.629
    55577C17:0 iso 3OH11.418.161
    55577C18:1 ω9c2.417.769
    55577C18:2 ω6,9c/C18:0 ANTE3.517.724
    55577Unidentified7.714.928
    55577Unidentified1.416.29
    55577unknown 16.5800.916.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
55577-+-+-++++-++---+-+--

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
55577-++++---++---

Isolation, sampling and environmental information

isolation

  • @ref: 55577
  • sample type: Human wound,dog bite
  • sampling date: 1999-10-08
  • geographic location: Växjö
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host#Mammals#Canidae (Dog)
#Host Body-Site#Other#Wound
#Infection#Patient

External links

@ref: 55577

culture collection no.: CCUG 42839

straininfo link

  • @ref: 105149
  • straininfo: 109380

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
55577Curators of the CCUGhttps://www.ccug.se/strain?id=42839Culture Collection University of Gothenburg (CCUG) (CCUG 42839)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
105149Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID109380.1