Strain identifier

BacDive ID: 150840

Type strain: No

Species: Pseudoglutamicibacter cumminsii

NCBI tax ID(s): 156979 (species)

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General

@ref: 55456

BacDive-ID: 150840

keywords: Bacteria

description: Pseudoglutamicibacter cumminsii CCUG 42541 B is a bacterium that was isolated from Human abscess,52-yr-old woman.

NCBI tax id

  • NCBI tax id: 156979
  • Matching level: species

doi: 10.13145/bacdive150840.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Pseudoglutamicibacter
  • species: Pseudoglutamicibacter cumminsii
  • full scientific name: Pseudoglutamicibacter cumminsii (Funke et al. 1997) Busse 2016

  • synonyms

    • @ref: 20215
    • synonym: Arthrobacter cumminsii

@ref: 55456

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Pseudoglutamicibacter

species: Pseudoglutamicibacter cumminsii

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation
6837516199urea-hydrolysis
6837529016arginine-hydrolysis
6837518257ornithine-degradation
683754853esculin-hydrolysis
6837517634D-glucose-fermentation
6837515824D-fructose-fermentation
6837516024D-mannose-fermentation
6837517306maltose-fermentation
6837517716lactose-fermentation
6837527082trehalose-fermentation
6837516899D-mannitol-fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate-reduction
6837517992sucrose-fermentation
6837559640N-acetylglucosamine-fermentation
6837532528turanose-fermentation
6837522599arabinose-fermentation
6837817634D-glucose-builds acid from
6837815824D-fructose-builds acid from
6837816024D-mannose-builds acid from
6837817306maltose-builds acid from
6837817716lactose-builds acid from
6837827082trehalose-builds acid from
6837816899D-mannitol-builds acid from
6837817151xylitol-builds acid from
6837828053melibiose-builds acid from
6837817632nitrate-reduction
6837816634raffinose+builds acid from
6837865327D-xylose-builds acid from
6837817992sucrose-builds acid from
68378320061methyl alpha-D-glucopyranoside-builds acid from
6837859640N-acetylglucosamine-builds acid from
6837829016arginine-hydrolysis
6837816199urea-hydrolysis

antibiotic resistance

@refmetaboliteis antibioticis sensitiveChEBIsensitivity conc.
68378lysostaphinyesyes
68375novobiocinyesyes283681.8 µg

metabolite production

@refChebi-IDmetaboliteproduction
6837815688acetoinyes
6837515688acetoinno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6837815688acetoin+
6837515688acetoin-

enzymes

@refvalueactivityec
68378urease-3.5.1.5
68378arginine dihydrolase-3.5.3.6
68378alkaline phosphatase-3.1.3.1
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase+3.4.19.3
68375alkaline phosphatase-3.1.3.1
68375L-arginine arylamidase+
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease-3.5.1.5
68379catalase+1.11.1.6
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    55456C14:03.514
    55456C15:00.815
    55456C16:017.216
    55456C18:00.618
    55456C13:0 ANTEISO0.312.701
    55456C14:0 3OH/C16:1 ISO I2.115.485
    55456C14:0 ISO2.113.618
    55456C15:0 ANTEISO26.114.711
    55456C15:0 ISO2.814.621
    55456C16:0 3OH1.417.52
    55456C16:0 iso11.315.626
    55456C16:1 ω7c0.815.819
    55456C17:0 anteiso11.316.722
    55456C17:0 iso0.416.629
    55456C18:1 ω7c /12t/9t18.117.824
    55456C18:1 ω9c0.417.769
    55456C18:2 ω6,9c/C18:0 ANTE0.917.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
55456-+++------+---------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
55456---+-+--+-++--------

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
55456-----------------+-+------

API STA

@refGLUFRUMNEMALLACTREMANXLTMELNITPALVPRAFXYLSACMDGNAGADHURELSTR
55456-----------++-------

Isolation, sampling and environmental information

isolation

  • @ref: 55456
  • sample type: Human abscess,52-yr-old woman
  • sampling date: 1999-08-03
  • geographic location: Linköping
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body-Site#Other#Abscess
#Infection#Patient

External links

@ref: 55456

culture collection no.: CCUG 42541 B

straininfo link

  • @ref: 105047
  • straininfo: 302910

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
55456Curators of the CCUGhttps://www.ccug.se/strain?id=42541Culture Collection University of Gothenburg (CCUG) (CCUG 42541 B)
68375Automatically annotated from API ID32STA
68378Automatically annotated from API STA
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
105047Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID302910.1