Strain identifier
version 8.1 (current version)
General
@ref: 55407
BacDive-ID: 150797
keywords: Bacteria
description: Rodentibacter pneumotropicus CCUG 42369 is a bacterium that was isolated from Mouse,naked.
NCBI tax id
- NCBI tax id: 758
- Matching level: species
doi: 10.13145/bacdive150797.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Rodentibacter
- species: Rodentibacter pneumotropicus
- full scientific name: Rodentibacter pneumotropicus (Jawetz 1950) Adhikary et al. 2017
synonyms
- @ref: 20215
- synonym: Pasteurella pneumotropica
@ref: 55407
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Rodentibacter
species: Rodentibacter pneumotropicus
type strain: no
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68377 | 17634 | D-glucose | + | builds acid from |
| 68377 | 15824 | D-fructose | + | builds acid from |
| 68377 | 17306 | maltose | + | builds acid from |
| 68377 | 17992 | sucrose | + | builds acid from |
| 68377 | 18257 | ornithine | + | degradation |
| 68377 | 16199 | urea | + | hydrolysis |
| 68377 | 27897 | tryptophan | + | energy source |
metabolite production
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- production: yes
metabolite tests
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- indole test: +
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68377 | tryptophan deaminase | + | 4.1.99.1 |
| 68377 | gamma-glutamyltransferase | + | 2.3.2.2 |
| 68377 | proline-arylamidase | - | 3.4.11.5 |
| 68377 | beta-galactosidase | + | 3.2.1.23 |
| 68377 | alkaline phosphatase | + | 3.1.3.1 |
| 68377 | lipase | - | |
| 68377 | urease | + | 3.5.1.5 |
| 68377 | ornithine decarboxylase | + | 4.1.1.17 |
| 68377 | beta-lactamase | - | 3.5.2.6 |
| 68382 | alkaline phosphatase | + | 3.1.3.1 |
| 68382 | esterase (C 4) | - | |
| 68382 | esterase lipase (C 8) | - | |
| 68382 | lipase (C 14) | - | |
| 68382 | leucine arylamidase | + | 3.4.11.1 |
| 68382 | valine arylamidase | - | |
| 68382 | cystine arylamidase | - | 3.4.11.3 |
| 68382 | trypsin | - | 3.4.21.4 |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 |
| 68382 | acid phosphatase | + | 3.1.3.2 |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | |
| 68382 | alpha-galactosidase | + | 3.2.1.22 |
| 68382 | beta-galactosidase | + | 3.2.1.23 |
| 68382 | beta-glucuronidase | - | 3.2.1.31 |
| 68382 | alpha-glucosidase | + | 3.2.1.20 |
| 68382 | beta-glucosidase | - | 3.2.1.21 |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
| 68382 | alpha-mannosidase | - | 3.2.1.24 |
| 68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
| @ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55407 | - | + | - | - | - | + | - | - | - | - | + | + | + | + | - | + | - | - | - | - |
API NH
| @ref | PEN | GLU | FRU | MAL | SAC | ODC | URE | LIP | PAL | beta GAL | ProA | GGT | IND |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55407 | - | + | + | + | + | + | + | - | + | + | - | + | + |
Isolation, sampling and environmental information
isolation
- @ref: 55407
- sample type: Mouse,naked
- sampling date: 1999-06-01
- geographic location: Linköping
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
- Cat1: #Host
- Cat2: #Mammals
- Cat3: #Muridae (Mouse/Rat)
External links
@ref: 55407
culture collection no.: CCUG 42369
straininfo link
- @ref: 105006
- straininfo: 109236
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 55407 | Curators of the CCUG | https://www.ccug.se/strain?id=42369 | Culture Collection University of Gothenburg (CCUG) (CCUG 42369) | |
| 68377 | Automatically annotated from API NH | |||
| 68382 | Automatically annotated from API zym | |||
| 105006 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID109236.1 |