Strain identifier

BacDive ID: 150735

Type strain: No

Species: Capnocytophaga canimorsus

NCBI tax ID(s): 28188 (species)

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General

@ref: 55337

BacDive-ID: 150735

keywords: Bacteria

description: Capnocytophaga canimorsus CCUG 42120 is a bacterium that was isolated from Human wound,dog bite,52-yr-old man.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive150735.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 55337

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase+3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase+3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    55337C14:00.714
    55337C15:00.915
    55337C16:05.316
    55337C18:01.618
    55337C13:0 iso0.512.612
    55337C14:0 ISO0.613.618
    55337C15:0 ANTEISO1.614.711
    55337C15:0 ISO53.814.621
    55337C15:0 ISO 3OH4.916.135
    55337C16:0 3OH117.52
    55337C16:0 iso0.515.626
    55337C16:1 ω7c0.515.819
    55337C17:0 iso0.316.629
    55337C17:0 iso 3OH7.318.161
    55337C18:1 ω9c3.817.769
    55337C18:2 ω6,9c/C18:0 ANTE5.317.724
    55337Unidentified8.614.936
    55337Unidentified1.116.292
    55337Unidentified0.518.053
    55337Unidentified0.518.096
    55337Unidentified0.618.306
    55337unknown 16.5800.416.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
55337-+++-++++-++---+-+-+

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
55337-++++---+++--

Isolation, sampling and environmental information

isolation

  • @ref: 55337
  • sample type: Human wound,dog bite,52-yr-old man
  • sampling date: 1999-04-01
  • geographic location: Sundsvall
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host#Mammals#Canidae (Dog)
#Host Body-Site#Other#Wound
#Infection#Patient

External links

@ref: 55337

culture collection no.: CCUG 42120

straininfo link

  • @ref: 104950
  • straininfo: 214430

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
55337Curators of the CCUGhttps://www.ccug.se/strain?id=42120Culture Collection University of Gothenburg (CCUG) (CCUG 42120)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
104950Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214430.1