Strain identifier

BacDive ID: 150671

Type strain: No

Species: Vibrio vulnificus

NCBI tax ID(s): 672 (species)

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General

@ref: 55266

BacDive-ID: 150671

keywords: Bacteria

description: Vibrio vulnificus CCUG 41928 is a bacterium of the family Vibrionaceae.

NCBI tax id

  • NCBI tax id: 672
  • Matching level: species

doi: 10.13145/bacdive150671.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio vulnificus
  • full scientific name: Vibrio vulnificus (Reichelt et al. 1979) Farmer 1980

  • synonyms

    • @ref: 20215
    • synonym: Beneckea vulnifica

@ref: 55266

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio vulnificus

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837430911sorbitol-builds acid from
6837417268myo-inositol-builds acid from
6837427082trehalose+builds acid from
6837462345L-rhamnose-builds acid from
6837418333D-arabitol-builds acid from
6837430849L-arabinose-builds acid from
6837417992sucrose-builds acid from
6837417634D-glucose+builds acid from
6837427897tryptophan-energy source
6837415792malonate-assimilation
6837418394palatinose-builds acid from
6837415963ribitol-builds acid from
6837417306maltose+builds acid from
6837416899D-mannitol-builds acid from
6837418024D-galacturonic acid-builds acid from
6837418403L-arabitol-builds acid from
6837416199urea-hydrolysis
6837425094lysine+degradation
6837417057cellobiose+builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837429016arginine-hydrolysis
6837418257ornithine+degradation
6836830849L-arabinose-fermentation
6836827613amygdalin+fermentation
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol-fermentation
6836817634D-glucose+fermentation
683685291gelatin+hydrolysis
6836827897tryptophan+energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine+degradation
6836825094lysine+degradation
6836829016arginine-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6837435581indoleno
6836835581indoleyes
6836815688acetoinno
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6837435581indole-
6836815688acetoin-
6836835581indole+

enzymes

@refvalueactivityec
68374beta-galactosidase+3.2.1.23
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase+3.2.1.23
68374L-aspartate arylamidase-3.4.11.21
68374alpha-maltosidase-
68374alpha-galactosidase+3.2.1.22
68374alpha-glucosidase+3.2.1.20
68374N-acetyl-beta-glucosaminidase+3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase+
68374urease-3.5.1.5
68374lysine decarboxylase+4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase+4.1.1.17
68368cytochrome oxidase+1.9.3.1
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase+4.1.1.17
68368lysine decarboxylase+4.1.1.18

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    55266C14:010.614
    55266C15:00.815
    55266C16:022.616
    55266C12:0 3OH2.413.455
    55266C13:0 ANTEISO0.712.701
    55266C13:0 ISO 2OH0.613.814
    55266C14:0 3OH/C16:1 ISO I515.485
    55266C15:0 ISO 3OH316.135
    55266C16:1 ω11c1.115.757
    55266C16:1 ω7c2815.819
    55266C16:1 ω7c/C15:0 ISO 2OH12.215.85
    55266C18:1 ω7c /12t/9t5.917.824
    55266Unidentified0.59.257
    55266Unidentified1.314.281
    55266Unidentified4.716.297
    55266unknown 12.4860.612.486
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
55266+-++----+-++------+-+

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
55266+-+----+-+-+-----+++---+++--+---

Isolation, sampling and environmental information

isolation

  • @ref: 55266
  • geographic location: Stockholm
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

External links

@ref: 55266

culture collection no.: CCUG 41928

straininfo link

  • @ref: 104891
  • straininfo: 109133

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
55266Curators of the CCUGhttps://www.ccug.se/strain?id=41928Culture Collection University of Gothenburg (CCUG) (CCUG 41928)
68368Automatically annotated from API 20E
68374Automatically annotated from API ID32E
104891Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID109133.1