Strain identifier

BacDive ID: 150607

Type strain: No

Species: Nocardia farcinica

NCBI tax ID(s): 37329 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 9.2 (current version):
version 8.1:
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 9.2 (current version)

General

@ref: 55196

BacDive-ID: 150607

keywords: Bacteria

description: Nocardia farcinica CCUG 41730 is a bacterium that was isolated from Human.

NCBI tax id

  • NCBI tax id: 37329
  • Matching level: species

doi: 10.13145/bacdive150607.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Nocardiaceae
  • genus: Nocardia
  • species: Nocardia farcinica
  • full scientific name: Nocardia farcinica Trevisan 1889 (Approved Lists 1980)

@ref: 55196

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Nocardiaceae

genus: Nocardia

species: Nocardia farcinica

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917306maltose-fermentation
6837916988D-ribose-fermentation
6837917634D-glucose-fermentation
6837916199urea+hydrolysis
6837917632nitrate+reduction
6837928087glycogen-fermentation
6837917992sucrose-fermentation
6837917716lactose-fermentation
6837916899D-mannitol-fermentation
6837965327D-xylose-fermentation
683795291gelatin-hydrolysis
683794853esculin+hydrolysis

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382trypsin+3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382cystine arylamidase+3.4.11.3
68382valine arylamidase+
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382alkaline phosphatase+3.1.3.1
68379urease+3.5.1.5
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379catalase+1.11.1.6
68379gelatinase-
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    55196C14:01.314
    55196C15:00.715
    55196C16:024.516
    55196C17:00.817
    55196C18:04.218
    55196C16:1 ω7c0.515.819
    55196C16:1 ω7c/C15:0 ISO 2OH16.115.85
    55196C18:1 ω9c4.917.769
    55196C18:2 ω6,9c/C18:0 ANTE8.217.724
    55196C19:0 ANTEISO5.918.729
    55196C20:1 ω9c1.119.77
    55196TBSA 10Me18:01518.392
    55196Unidentified0.414.285
    55196Unidentified3.116.169
    55196Unidentified10.316.303
    55196Unidentified0.418.057
    55196Unidentified1.118.102
    55196Unidentified1.218.314
    55196Unidentified0.518.554
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
55196++++--+-++----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
55196-+---+++++++-+-++---

Isolation, sampling and environmental information

isolation

  • @ref: 55196
  • sample type: Human
  • sampling date: 1998
  • geographic location: Stockholm
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

  • Cat1: #Host
  • Cat2: #Human

External links

@ref: 55196

culture collection no.: CCUG 41730

straininfo link

  • @ref: 104839
  • straininfo: 109070

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
55196Curators of the CCUGhttps://www.ccug.se/strain?id=41730Culture Collection University of Gothenburg (CCUG) (CCUG 41730)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
104839Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID109070.1