Strain identifier

BacDive ID: 150424

Type strain: No

Species: Microbacterium sp.

NCBI tax ID(s): 51671 (species)

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General

@ref: 54978

BacDive-ID: 150424

keywords: Bacteria, aerobe, mesophilic

description: Microbacterium sp. CCUG 39880 is an aerobe, mesophilic bacterium that was isolated from Water,municipal drinking water.

NCBI tax id

  • NCBI tax id: 51671
  • Matching level: species

doi: 10.13145/bacdive150424.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Microbacteriaceae
  • genus: Microbacterium
  • species: Microbacterium sp.
  • full scientific name: Microbacterium Orla-Jensen 1919 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Aureobacterium

@ref: 54978

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Microbacteriaceae

genus: Microbacterium

species: Microbacterium sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 54978
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 54978
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    54978C14:00.814
    54978C16:00.916
    54978C13:0 3OH/C15:1 i I/H0.314.469
    54978C13:0 ANTEISO0.212.701
    54978C14:0 ISO1.613.618
    54978C15:0 ANTEISO6514.711
    54978C15:0 ISO6.214.621
    54978C15:1 ω6c0.214.856
    54978C16:0 iso515.626
    54978C16:1 ISO H3.215.461
    54978C16:1 ω7c1.415.819
    54978C17:0 anteiso6.616.722
    54978C17:0 iso0.516.629
    54978C17:1 ω9c ANTEISO4.916.525
    54978C18:2 ω6,9c/C18:0 ANTE0.217.724
    54978Unidentified2.815.026
    54978Unidentified0.217.593
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
54978-+-+-++++-+---------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
54978-+---+--+-++-+-+----

Isolation, sampling and environmental information

isolation

  • @ref: 54978
  • sample type: Water,municipal drinking water
  • sampling date: 1998-10-01

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic

External links

@ref: 54978

culture collection no.: CCUG 39880

straininfo link

  • @ref: 104683
  • straininfo: 302906

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
54978Curators of the CCUGhttps://www.ccug.se/strain?id=39880Culture Collection University of Gothenburg (CCUG) (CCUG 39880)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
104683Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID302906.1