Strain identifier

BacDive ID: 150386

Type strain: No

Species: Acidovorax defluvii

NCBI tax ID(s): 86669 (species)

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General

@ref: 54938

BacDive-ID: 150386

keywords: Bacteria

description: Acidovorax defluvii CCUG 39798 is a bacterium that was isolated from Water,municipal drinking water.

NCBI tax id

  • NCBI tax id: 86669
  • Matching level: species

doi: 10.13145/bacdive150386.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Comamonadaceae
  • genus: Acidovorax
  • species: Acidovorax defluvii
  • full scientific name: Acidovorax defluvii Schulze et al. 1999

@ref: 54938

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Comamonadaceae

genus: Acidovorax

species: Acidovorax defluvii

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate+assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • @reffatty acidpercentageECL
    54938C9:00.19
    54938C14:01.214
    54938C15:01.215
    54938C16:036.216
    54938C17:00.317
    54938C18:00.518
    54938C11:0 ANTEISO0.110.693
    54938C14:1 ω5c0.113.899
    54938C15:1 ω6c0.414.856
    54938C16:0 iso0.115.626
    54938C16:1 ω7c37.115.819
    54938C17:0 CYCLO14.716.888
    54938C18:1 ω7c /12t/9t517.824
    54938C18:1 ω9c0.317.769
    54938C18:2 ω6,9c/C18:0 ANTE0.717.724
    54938C8:0 3OH1.69.385
    54938Unidentified0.19.215
    54938Unidentified0.216.086
    54938Unidentified0.318.435
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG
  • @reffatty acidpercentageECL
    54938C10:00.210
    54938C12:04.312
    54938C14:04.214
    54938C15:02.515
    54938C16:015.816
    54938C10:0 3OH4.211.423
    54938C13:0 ISO 2OH0.313.814
    54938C15:1 ω6c0.414.856
    54938C16:1 ω7c56.115.819
    54938C17:0 CYCLO1.716.888
    54938C18:1 ω7c /12t/9t917.824
    54938C8:0 3OH1.19.385
    54938Unidentified0.317.706
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
54938-+-+-+-----+--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
54938+---------------+---+

Isolation, sampling and environmental information

isolation

  • @ref: 54938
  • sample type: Water,municipal drinking water
  • sampling date: 1998-09-01

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic

External links

@ref: 54938

culture collection no.: CCUG 39798

straininfo link

  • @ref: 104655
  • straininfo: 214425

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
54938Curators of the CCUGhttps://www.ccug.se/strain?id=39798Culture Collection University of Gothenburg (CCUG) (CCUG 39798)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
104655Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214425.1