Strain identifier

BacDive ID: 150195

Type strain: No

Species: Slackia exigua

NCBI tax ID(s): 84109 (species)

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General

@ref: 54712

BacDive-ID: 150195

keywords: Bacteria

description: Slackia exigua CCUG 39259 is a bacterium that was isolated from Human blood,osteomyelitis,sacrum.

NCBI tax id

  • NCBI tax id: 84109
  • Matching level: species

doi: 10.13145/bacdive150195.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Coriobacteriia
  • order: Eggerthellales
  • family: Eggerthellaceae
  • genus: Slackia
  • species: Slackia exigua
  • full scientific name: Slackia exigua (Poco et al. 1996) Wade et al. 1999

  • synonyms

    • @ref: 20215
    • synonym: Eubacterium exiguum

@ref: 54712

domain: Bacteria

phylum: Actinobacteria

class: Coriobacteriia

order: Eggerthellales

family: Eggerthellaceae

genus: Slackia

species: Slackia exigua

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838016199urea-hydrolysis
6838029016arginine+hydrolysis
6838016024D-mannose-fermentation
6838016634raffinose-fermentation
6838029985L-glutamate-degradation
6838017632nitrate-reduction
6838027897tryptophan-energy source

metabolite production

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68380serine arylamidase+
68380glutamyl-glutamate arylamidase-
68380histidine arylamidase-
68380glycin arylamidase+
68380alanine arylamidase+3.4.11.2
68380tyrosine arylamidase+
68380pyrrolidonyl arylamidase-3.4.19.3
68380leucine arylamidase+3.4.11.1
68380phenylalanine arylamidase+
68380leucyl glycin arylamidase-3.4.11.1
68380proline-arylamidase+3.4.11.5
68380L-arginine arylamidase+
68380alkaline phosphatase-3.1.3.1
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase-3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380N-acetyl-beta-glucosaminidase-3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase-3.2.1.21
68380alpha-glucosidase-3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase-3.2.1.23
68380alpha-galactosidase-3.2.1.22
68380arginine dihydrolase+3.5.3.6
68380urease-3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    54712C14:0614
    54712C16:018.216
    54712C18:05.918
    54712C14:0 ISO2.313.618
    54712C16:0 aldehyde4.814.949
    54712C17:1 ISO I/C16:0 DMA23.416.481
    54712C18:1 ω7c /12t/9t317.824
    54712C18:1 ω9c2517.769
    54712C18:2 ω6,9c/C18:0 ANTE9.117.724
    54712C19:1 ISO I2.418.473
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
54712-+---------------++-++-+++--+

Isolation, sampling and environmental information

isolation

  • @ref: 54712
  • sample type: Human blood,osteomyelitis,sacrum
  • sampling date: 1998-03-23
  • geographic location: Halmstad
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood
#Infection#Inflammation
#Infection#Patient

External links

@ref: 54712

culture collection no.: CCUG 39259

straininfo link

  • @ref: 104486
  • straininfo: 53955

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
54712Curators of the CCUGhttps://www.ccug.se/strain?id=39259Culture Collection University of Gothenburg (CCUG) (CCUG 39259)
68380Automatically annotated from API rID32A
104486Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID53955.1