Strain identifier
BacDive ID: 15015
Type strain: 
Species: Kitasatospora aureofaciens
Strain Designation: A-377
Strain history: CIP <- 1957, M. Lumb <- B. Duggar, Lederle Labs.: strain A-377
NCBI tax ID(s): 1894 (species)
version 8.1 (current version)
General
@ref: 9330
BacDive-ID: 15015
DSM-Number: 40127
keywords: genome sequence, 16S sequence, Bacteria, obligate aerobe, spore-forming, mesophilic, antibiotic compound production
description: Kitasatospora aureofaciens A-377 is an obligate aerobe, spore-forming, mesophilic bacterium that builds an aerial mycelium and produces antibiotic compounds.
NCBI tax id
- NCBI tax id: 1894
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9330 | <- E.B. Shirling, ISP <- E. Backus, Lederle Labs., A-377 |
| 67770 | KCC S-0008 <-- Y. Okami (NIHJ 101) <-- NRRL 2209 <-- Lederle Labs.; A-377. |
| 116569 | CIP <- 1957, M. Lumb <- B. Duggar, Lederle Labs.: strain A-377 |
doi: 10.13145/bacdive15015.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Kitasatospora
- species: Kitasatospora aureofaciens
- full scientific name: Kitasatospora aureofaciens (Duggar 1948) Labeda et al. 2017
synonyms
@ref synonym 20215 Streptomyces avellaneus 20215 Streptomyces aureofaciens 20215 Streptomyces psammoticus 20215 Kitasatospora psammotica
@ref: 9330
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Kitasatospora
species: Kitasatospora aureofaciens
full scientific name: Kitasatospora aureofaciens (Duggar 1948) Labeda et al. 2017
strain designation: A-377
type strain: yes
Morphology
cell morphology
| @ref | motility | confidence | gram stain | cell shape |
|---|---|---|---|---|
| 69480 | no | 93.814 | ||
| 69480 | 100 | positive | ||
| 116569 | positive | rod-shaped |
colony morphology
| @ref | colony color | medium used |
|---|---|---|
| 69247 | Beige (1001) | suter with tyrosine |
| 69247 | Beige (1001) | suter without tyrosine |
| 69247 | Honey yellow (1005) | ISP 7 |
| 69247 | Ochre yellow (1024) | ISP 4 |
| 69247 | Sand yellow (1002) | ISP 2 |
| 69247 | Sand yellow (1002) | ISP 3 |
| 69247 | Sand yellow (1002) | ISP 5 |
| 69247 | Sand yellow (1002) | ISP 6 |
multicellular morphology
| @ref | forms multicellular complex | complex name | complex color | medium name |
|---|---|---|---|---|
| 69247 | yes | Aerial mycelium | Ral 7036 platinum grey, ral 9016 traffic white | ISP 2 |
| 69247 | yes | Aerial mycelium | Ral 7023 concrete grey | ISP 3 |
| 69247 | yes | Aerial mycelium | Ral 7006 beige grey | ISP 4 |
| 69247 | yes | Aerial mycelium | Ral 7006 beige grey, ral 9001 cream | ISP 5 |
| 69247 | yes | Aerial mycelium | ISP 6 | |
| 69247 | no | Aerial mycelium | ISP 7 | |
| 69247 | no | Aerial mycelium | suter with tyrosine | |
| 69247 | no | Aerial mycelium | suter without tyrosine |
pigmentation
- @ref: 69247
- production: no
- name: soluble pigment
multimedia
| @ref | multimedia content | caption | intellectual property rights |
|---|---|---|---|
| 9330 | https://www.dsmz.de/microorganisms/photos/DSM_40127.jpg | Medium 84 28°C | © Leibniz-Institut DSMZ |
| 69247 | DSM_40127_image3.jpeg | Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7) | Helmholtz-Zentrum für Infektionsforschung GmbH |
| 69247 | DSM_40127_image4.jpeg | Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7) | Helmholtz-Zentrum für Infektionsforschung GmbH |
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9330 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://mediadive.dsmz.de/medium/84 | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water |
| 9330 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 37599 | MEDIUM 122 - for Streptomyces | yes | Distilled water make up to (1000.000 ml);Agar (15.000 g);Yeast extract (2.000 g);Starch maize (10.000 g) | |
| 116569 | CIP Medium 122 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=122 |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 19405 | positive | optimum | 28 | mesophilic |
| 9330 | positive | growth | 28 | mesophilic |
| 37599 | positive | growth | 30 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
| 116569 | positive | growth | 30 | mesophilic |
| 116569 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 116569
- oxygen tolerance: obligate aerobe
spore formation
| @ref | spore description | spore formation | confidence |
|---|---|---|---|
| 19405 | Formation of spore chains: rectiflixibilis,spore surface: smooth | yes | |
| 69481 | yes | 100 | |
| 69480 | yes | 100 |
compound production
| @ref | compound |
|---|---|
| 9330 | chlortetracycline |
| 9330 | tetracycline |
| 9330 | aureomycin |
halophily
- @ref: 69247
- salt: NaCl
- growth: positive
- tested relation: growth
- concentration: 0 %
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 69247 | 22599 | arabinose | +/- | growth |
| 69247 | 62968 | cellulose | - | growth |
| 69247 | 28757 | fructose | +/- | growth |
| 69247 | 17234 | glucose | + | growth |
| 69247 | 17268 | inositol | - | growth |
| 69247 | 37684 | mannose | - | growth |
| 69247 | 16634 | raffinose | - | growth |
| 69247 | 26546 | rhamnose | - | growth |
| 69247 | 17992 | sucrose | +/- | growth |
| 69247 | 18222 | xylose | + | growth |
| 68368 | 5291 | gelatin | + | hydrolysis |
| 68368 | 27897 | tryptophan | - | energy source |
| 68368 | 16199 | urea | + | hydrolysis |
| 68368 | 16947 | citrate | - | assimilation |
| 68368 | 18257 | ornithine | + | degradation |
| 68368 | 25094 | lysine | + | degradation |
| 68368 | 29016 | arginine | + | hydrolysis |
| 116569 | 4853 | esculin | - | hydrolysis |
| 116569 | 17632 | nitrate | - | reduction |
| 116569 | 16301 | nitrite | - | reduction |
| 116569 | 17632 | nitrate | - | respiration |
| 68379 | 17632 | nitrate | - | reduction |
| 68379 | 4853 | esculin | - | hydrolysis |
| 68379 | 16199 | urea | - | hydrolysis |
| 68379 | 5291 | gelatin | + | hydrolysis |
| 68379 | 17634 | D-glucose | - | fermentation |
| 68379 | 16988 | D-ribose | - | fermentation |
| 68379 | 65327 | D-xylose | - | fermentation |
| 68379 | 16899 | D-mannitol | - | fermentation |
| 68379 | 17306 | maltose | - | fermentation |
| 68379 | 17716 | lactose | - | fermentation |
| 68379 | 17992 | sucrose | - | fermentation |
| 68379 | 28087 | glycogen | - | fermentation |
metabolite production
| @ref | Chebi-ID | metabolite | production |
|---|---|---|---|
| 67770 | 27644 | chlortetracycline | yes |
| 68368 | 15688 | acetoin | no |
| 68368 | 35581 | indole | no |
| 68368 | 16136 | hydrogen sulfide | no |
| 116569 | 35581 | indole | no |
metabolite tests
| @ref | Chebi-ID | metabolite | voges-proskauer-test | indole test |
|---|---|---|---|---|
| 68368 | 15688 | acetoin | - | |
| 68368 | 35581 | indole | - |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68379 | gelatinase | + | |
| 68379 | urease | - | 3.5.1.5 |
| 68379 | beta-glucosidase | - | 3.2.1.21 |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
| 68379 | alpha-glucosidase | + | 3.2.1.20 |
| 68379 | beta-galactosidase | - | 3.2.1.23 |
| 68379 | beta-glucuronidase | - | 3.2.1.31 |
| 68379 | alkaline phosphatase | + | 3.1.3.1 |
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
| 68379 | pyrazinamidase | - | 3.5.1.B15 |
| 68368 | gelatinase | + | |
| 68368 | tryptophan deaminase | - | 4.1.99.1 |
| 68368 | urease | + | 3.5.1.5 |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 |
| 68368 | lysine decarboxylase | + | 4.1.1.18 |
| 68368 | arginine dihydrolase | + | 3.5.3.6 |
| 68368 | beta-galactosidase | + | 3.2.1.23 |
| 116569 | oxidase | - | |
| 116569 | beta-galactosidase | - | 3.2.1.23 |
| 116569 | alcohol dehydrogenase | - | 1.1.1.1 |
| 116569 | gelatinase | +/- | |
| 116569 | amylase | + | |
| 116569 | DNase | + | |
| 116569 | caseinase | + | 3.4.21.50 |
| 116569 | catalase | + | 1.11.1.6 |
| 116569 | tween esterase | - | |
| 116569 | lecithinase | - | |
| 116569 | lysine decarboxylase | - | 4.1.1.18 |
| 116569 | ornithine decarboxylase | - | 4.1.1.17 |
| 116569 | urease | - | 3.5.1.5 |
| 68382 | esterase (C 4) | + | |
| 68382 | esterase lipase (C 8) | + | |
| 68382 | lipase (C 14) | - | |
| 68382 | leucine arylamidase | + | 3.4.11.1 |
| 68382 | trypsin | - | 3.4.21.4 |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 |
| 68382 | acid phosphatase | + | 3.1.3.2 |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | |
| 68382 | beta-galactosidase | + | 3.2.1.23 |
| 68382 | beta-glucuronidase | - | 3.2.1.31 |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
| 68382 | alpha-fucosidase | - | 3.2.1.51 |
API coryne
| @ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69247 | - | - | - | + | - | - | + | - | - | - | + | - | - | - | - | - | - | - | - |
API zym
| @ref | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase | Control |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69247 | + | + | + | - | + | + | +/- | - | - | + | + | +/- | + | - | + | +/- | - | + | - | |
| 116569 | - | + | + | - | + | - | - | - | - | + | + | - | + | - | - | - | - | - | - | - |
API 20E
| @ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 19405 | + | + | + | + | - | - | + | - | - | - | + |
API biotype100
| @ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116569 | + | + | + | + | - | - | - | + | - | + | + | - | - | - | - | + | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | - | + | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | + | + | - | - | - | + | - | - | - | + | + | + | + | - | + | + | - | - | + | + |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 9330 | Soil, timothy field | Missouri | USA | USA | North America |
| 67770 | Soil, a timothy field | MO | USA | USA | North America |
| 116569 | Environment, Soil | Missouri | United States of America | USA | North America |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
| @ref | biosafety level | biosafety level comment |
|---|---|---|
| 9330 | 1 | Risk group (German classification) |
| 19405 | 1 | Risk group (German classification) |
| 116569 | 1 | Risk group (French classification) |
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces aureofaciens strain DSM 40127 clone ITS 16S-23S ribosomal RNA intergenic spacer, partial sequence | AY296975 | 238 | ena | 1894 |
| 20218 | Streptomyces aureofaciens strain DSM 40127 clone ITS18 16S-23S ribosomal RNA intergenic spacer, partial sequence | AY296976 | 238 | ena | 1894 |
| 20218 | Streptomyces aureofaciens strain DSM 40127 clone ITS19 16S-23S ribosomal RNA intergenic spacer, partial sequence | AY296977 | 236 | ena | 1894 |
| 20218 | Streptomyces aureofaciens strain DSM 40127 clone ITS20 16S-23S ribosomal RNA intergenic spacer, partial sequence | AY296978 | 239 | ena | 1894 |
| 20218 | Streptomyces aureofaciens strain DSM 40127 clone ITS30 16S-23S ribosomal RNA intergenic spacer, partial sequence | AY296979 | 236 | ena | 1894 |
| 20218 | Streptomyces aureofaciens strain DSM 40127 clone ITS9 16S-23S ribosomal RNA intergenic spacer, partial sequence | AY296980 | 241 | ena | 1894 |
| 20218 | Streptomyces aureofaciens strain IMET 43577 16S ribosomal RNA gene, partial sequence | AY289116 | 1509 | ena | 1894 |
| 20218 | Streptomyces bobili gene for 16S rRNA | AB045876 | 1483 | ena | 67280 |
| 20218 | Streptomyces aureofaciens gene for 16S rRNA | AB045881 | 1473 | ena | 1894 |
| 20218 | Streptomyces aureofaciens gene for 16S ribosomal RNA, partial sequence, strain: JCM 4624 | D44273 | 120 | ena | 1894 |
| 20218 | Streptomyces aureofaciens gene for 16S rRNA, partial sequence, strain: NBRC 12594 | AB184105 | 1468 | ena | 1894 |
| 20218 | Streptomyces aureofaciens gene for 16S rRNA, partial sequence, strain: NBRC 12843 | AB184189 | 1460 | ena | 1894 |
| 20218 | Streptomyces aureofaciens gene for 16S rRNA, partial sequence, strain: NBRC 3712 | AB184783 | 1468 | ena | 1894 |
| 20218 | Streptomyces aureofaciens 16S rRNA gene, strain NRRL 2209 | Y15504 | 1469 | ena | 1894 |
| 20218 | Shewanella sp. SPSA4 partial 16S rRNA gene, strain SPSA4 | AM884366 | 486 | ena | 470054 |
| 20218 | Pseudomonas aeruginosa strain RPATPSA4 16S ribosomal RNA gene, partial sequence | JQ303330 | 650 | ena | 287 |
| 9330 | Streptomyces aureofaciens 16S ribosomal RNA gene, partial sequence | AY207608 | 1512 | ena | 1894 |
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Streptomyces lavendulae subsp. lavendulae CCM 3239 | GCA_002803845 | complete | ncbi | 58340 |
| 66792 | Kitasatospora aureofaciens strain CCM3239 | 1894.23 | plasmid | patric | 1894 |
| 66792 | Streptomyces aureofaciens strain ATCC 10762 | 1894.10 | wgs | patric | 1894 |
| 66792 | Streptomyces aureofaciens strain NRRL 2209 | 1894.9 | wgs | patric | 1894 |
| 66792 | Streptomyces lavendulae subsp. lavendulae strain CCM 3239 | 58340.28 | plasmid | patric | 58340 |
| 66792 | Streptomyces lividans strain TK24-YQS040 | 1916.16 | complete | patric | 1916 |
| 66792 | Streptomyces lavendulae lavendulae CCM 3239 | 2862374732 | complete | img | 58340 |
| 66792 | Kitasatospora aureofaciens ATCC 10762 | 2654587546 | draft | img | 1894 |
| 66792 | Kitasatospora aureofaciens CCM 3239 | 2563366690 | draft | img | 1894 |
| 66792 | Kitasatospora aureofaciens CCM 3239 | 2563366689 | draft | img | 1894 |
| 66792 | Kitasatospora aureofaciens CCM 3239 | 2563366691 | draft | img | 1894 |
| 66792 | Kitasatospora aureofaciens CCM 3239 | 2582581494 | draft | img | 1894 |
| 66792 | Kitasatospora aureofaciens NRRL 2209 | 2639762732 | draft | img | 1894 |
| 67770 | Kitasatospora aureofaciens NRRL B-2183 | GCA_000720845 | contig | ncbi | 1894 |
| 67770 | Kitasatospora aureofaciens NRRL B-2657 | GCA_000719175 | contig | ncbi | 1894 |
| 67770 | Kitasatospora aureofaciens ATCC 10762 | GCA_001188955 | contig | ncbi | 1894 |
| 67770 | Kitasatospora aureofaciens NRRL 2209 | GCA_000978515 | contig | ncbi | 1894 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | yes | 100 | no |
| flagellated | no | 97.357 | no |
| gram-positive | yes | 87.048 | no |
| anaerobic | no | 98.89 | no |
| halophile | no | 94.659 | yes |
| spore-forming | yes | 94.162 | yes |
| glucose-util | yes | 90.996 | yes |
| aerobic | yes | 89.104 | no |
| thermophile | no | 99.035 | yes |
| motile | no | 94.215 | no |
| glucose-ferment | no | 88.795 | no |
External links
@ref: 9330
culture collection no.: DSM 40127, ATCC 10762, ATCC 23884, CBS 664.68, IFO 12594, IFO 12843, ISP 5127, JCM 4008, KACC 20180, NBRC 12594, NBRC 12843, NRRL 2209, RIA 1129, BCRC 11610, CBS 434.51, CCM 3239, CECT 3206, CGMCC 4.0568, CIP 57.11, HAMBI 1072, HAMBI 313, HUT 6048, HUT 6097, ICMP 499, IFM 1042, IFM 1218, IFM 1219, IFO 3712, IMET 43577, JCM 4624, LMG 5968, MTCC 325, NBIMCC 3424, NBRC 3712, NCAIM B.01479, NCIMB 8234, NRRL B-2183, NRRL B-2657, NRRL B-5404, NRRL ISP-5127, RIA 57, VKM Ac-771, VTT E-042475
straininfo link
- @ref: 84122
- straininfo: 389336
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Enzymology | 1398084 | Cloning and sequencing of the gene encoding a ribonuclease from Streptomyces aureofaciens CCM3239. | Homerova D, Hollanderova Z, Kormanec J, Sevcik J | Gene | 10.1016/0378-1119(92)90082-z | 1992 | Base Sequence, DNA, Bacterial, Genes, Bacterial, *Isoenzymes, Molecular Sequence Data, Ribonucleases/*genetics, Streptomyces aureofaciens/enzymology/*genetics | Genetics |
| Enzymology | 1527491 | Molecular cloning and sequencing of a non-haem bromoperoxidase gene from Streptomyces aureofaciens ATCC 10762. | Pfeifer O, Pelletier I, Altenbuchner J, van Pee KH | J Gen Microbiol | 10.1099/00221287-138-6-1123 | 1992 | Amino Acid Sequence, Base Sequence, Cloning, Molecular, Codon, Metalloproteins/biosynthesis/*genetics/isolation & purification, Molecular Sequence Data, Nonheme Iron Proteins, Peroxidases/biosynthesis/*genetics/isolation & purification, Recombinant Proteins/biosynthesis/isolation & purification, Restriction Mapping, Streptomyces/*genetics | Phylogeny |
| Enzymology | 1783900 | Purification, characterization and comparison of two non-haem bromoperoxidases from Streptomyces aureofaciens ATCC 10762. | Weng M, Pfeifer O, Krauss S, Lingens F, van Pee KH | J Gen Microbiol | 10.1099/00221287-137-11-2539 | 1991 | Amino Acid Sequence, Amino Acids/analysis, Chromatography, Affinity, Electrophoresis, Polyacrylamide Gel, Immunodiffusion, Molecular Sequence Data, Peroxidases/chemistry/immunology/isolation & purification/*metabolism, Streptomyces aureofaciens/*enzymology | Genetics |
| Enzymology | 1920414 | Crystallization and preliminary X-ray data of bromoperoxidase from Streptomyces aureofaciens ATCC 10762. | Sobek H, Haag T, Pfeifer O, Schomburg D, Lingens F, van Pee KH | J Mol Biol | 10.1016/0022-2836(91)80199-5 | 1991 | Crystallization, Peroxidases/*chemistry, Streptomyces aureofaciens/*enzymology, X-Ray Diffraction | |
| Metabolism | 6125457 | Properties of apyrase and inorganic pyrophosphatase in Streptomyces aureofaciens. | Curdova E, Jechova V, Hostalek Z | Folia Microbiol (Praha) | 10.1007/BF02877394 | 1982 | Adenosine Triphosphate/metabolism, Apyrase/isolation & purification/*metabolism, Hydrogen-Ion Concentration, Magnesium/pharmacology, Membranes/enzymology, Nucleotides/metabolism, Phosphoric Monoester Hydrolases/*metabolism, Pyrophosphatases/isolation & purification/*metabolism, Streptomyces/*enzymology, Substrate Specificity | Enzymology |
| Enzymology | 7664081 | The metal-ion-free oxidoreductase from Streptomyces aureofaciens has an alpha/beta hydrolase fold. | Hecht HJ, Sobek H, Haag T, Pfeifer O, van Pee KH | Nat Struct Biol | 10.1038/nsb0894-532 | 1994 | Amino Acid Sequence, Bacterial Proteins/*chemistry, Binding Sites, Catalysis, Crystallography, X-Ray, Hydrolases/chemistry, *Models, Molecular, Molecular Sequence Data, Peroxidases/*chemistry, *Protein Conformation, Sequence Alignment, Sequence Homology, Amino Acid, Streptomyces aureofaciens/*enzymology | Genetics |
| Enzymology | 8012573 | Cloning of a second non-haem bromoperoxidase gene from Streptomyces aureofaciens ATCC 10762: sequence analysis, expression in Streptomyces lividans and enzyme purification. | Pelletier I, Pfeifer O, Altenbuchner J, van Pee KH | Microbiology (Reading) | 10.1099/00221287-140-3-509 | 1994 | Amino Acid Sequence, Base Sequence, Cloning, Molecular, DNA, Bacterial/genetics, Gene Expression, *Genes, Bacterial, Molecular Sequence Data, Open Reading Frames, Peroxidases/*genetics/isolation & purification, Restriction Mapping, Sequence Homology, Amino Acid, Streptomyces/genetics, Streptomyces aureofaciens/*enzymology/*genetics | Genetics |
| Enzymology | 8157602 | Chloroperoxidase from Streptomyces lividans: isolation and characterization of the enzyme and the corresponding gene. | Bantleon R, Altenbuchner J, van Pee KH | J Bacteriol | 10.1128/jb.176.8.2339-2347.1994 | 1994 | Amino Acid Sequence, Base Sequence, Chloride Peroxidase/chemistry/*genetics/*isolation & purification/metabolism, Cloning, Molecular, Gene Expression, Genes, Bacterial/*genetics, Indoles/metabolism, Isoelectric Point, Metals/analysis, Molecular Sequence Data, Molecular Weight, Sequence Homology, Amino Acid, Streptomyces/*enzymology/genetics | Phylogeny |
| Metabolism | 9674144 | Iron deficiency-induced tetracycline production in submerged cultures by Streptomyces aureofaciens. | Bechet M, Blondeau R | J Appl Microbiol | 10.1046/j.1365-2672.1998.00428.x | 1998 | Iron/*metabolism/pharmacology, Mutation, Siderophores/biosynthesis, Streptomyces aureofaciens/genetics/growth & development/*metabolism, Tetracycline/*biosynthesis | Biotechnology |
| Enzymology | 11320322 | Purification, crystallization and preliminary X-ray analysis of two crystal forms of ribonuclease Sa3. | Hlinkova V, Urbanikova L, Krajcikova D, Sevcik J | Acta Crystallogr D Biol Crystallogr | 10.1107/s0907444901003456 | 2001 | Crystallization, Crystallography, X-Ray, Isoenzymes/*chemistry/isolation & purification, Protein Conformation, Ribonucleases/*chemistry/isolation & purification, Streptomyces aureofaciens/enzymology | Phylogeny |
| Genetics | 12080419 | Use of degenerate primers and touchdown PCR to amplify a halogenase gene fragment from Streptomyces venezuelae ISP5230. | Piraee M, Vining LC | J Ind Microbiol Biotechnol | 10.1038/sj.jim.7000263 | 2002 | Amino Acid Sequence, Blotting, Southern, DNA Primers/*genetics, Genes, Bacterial/*genetics, Molecular Sequence Data, Oxidoreductases/chemistry/*genetics, Polymerase Chain Reaction/*methods, Sensitivity and Specificity, Sequence Homology, Amino Acid, Streptomyces/classification/enzymology/*genetics | Enzymology |
| Enzymology | 12384301 | Cloning and characterization of a polyketide synthase gene cluster involved in biosynthesis of a proposed angucycline-like polyketide auricin in Streptomyces aureofaciens CCM 3239. | Novakova R, Bistakova J, Homerova D, Rezuchova B, Kormanec J | Gene | 10.1016/s0378-1119(02)00889-2 | 2002 | Amino Acid Sequence, Anti-Bacterial Agents/*biosynthesis, Base Sequence, Chromosome Mapping, Cloning, Molecular, DNA, Bacterial/chemistry/genetics, Gene Order, Molecular Sequence Data, Multienzyme Complexes/*genetics/metabolism, Multigene Family/*genetics, Mutation, Phylogeny, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Streptomyces aureofaciens/*genetics/metabolism, Transcription Initiation Site | Genetics |
| Metabolism | 12559428 | Synthesis of PHB by recombinant E. coli harboring an approximately 5 kb genomic DNA fragment from Streptomyces aureofaciens NRRL 2209. | Ramachander TV, Rohini D, Belhekar A, Rawal SK | Int J Biol Macromol | 10.1016/s0141-8130(02)00068-5 | 2002 | Calorimetry, Differential Scanning, Carbon/metabolism, Carboxylic Acids/*chemistry, Chromatography, Gas, Cloning, Molecular, DNA/*genetics, Escherichia coli/*metabolism, Genetic Vectors, Glycerol/metabolism, Magnetic Resonance Spectroscopy, Microscopy, Electron, Microscopy, Electron, Scanning, Models, Chemical, Plasmids/metabolism, Plastics/metabolism, Spectroscopy, Fourier Transform Infrared, Streptomyces aureofaciens/*metabolism, Temperature | Enzymology |
| Metabolism | 12608576 | Poly(3-hydroxybutyrate) (PHB) synthesis by recombinant Escherichia coli harbouring Streptomyces aureofaciens PHB biosynthesis genes: effect of various carbon and nitrogen sources. | Mahishi LH, Tripathi G, Rawal SK | Microbiol Res | 10.1078/0944-5013-00161 | 2003 | Acyltransferases/genetics/metabolism, Alcohol Oxidoreductases/genetics/metabolism, Amino Acid Sequence, Bacterial Proteins/*genetics/metabolism, Base Sequence, Carbon/*pharmacology, Escherichia coli/drug effects/genetics/*metabolism/ultrastructure, Hydroxybutyrates/*metabolism, Microscopy, Electron, Scanning, Molecular Sequence Data, Nitrogen/*pharmacology, Polyesters/*metabolism, Streptomyces aureofaciens/*genetics | Genetics |
| Metabolism | 15365693 | Characterization of the polyketide spore pigment cluster whiESa in Streptomyces aureofaciens CCM3239. | Novakova R, Bistakova J, Kormanec J | Arch Microbiol | 10.1007/s00203-004-0720-2 | 2004 | Bacterial Proteins/chemistry/*genetics/*metabolism, Base Sequence, Gene Expression Regulation, Bacterial, Molecular Sequence Data, *Multigene Family, Mutation, Peptides/chemistry/genetics/*metabolism, Polyketide Synthases/chemistry/*genetics/metabolism, Promoter Regions, Genetic, Sequence Analysis, DNA, Sigma Factor, Streptomyces aureofaciens/genetics/*growth & development/metabolism, Transcription Factors, Transcription, Genetic | Genetics |
| Enzymology | 15497441 | Cloning and characterization of a new polyketide synthase gene cluster in Streptomyces aureofaciens CCM 3239. | Novakova R, Bistakova J, Homerova D, Rezuchova B, Feckova L, Kormanec J | DNA Seq | 10.1080/10425170410001710556 | 2004 | Base Sequence, Blotting, Southern, Cloning, Molecular, Electrophoresis, Agar Gel, Gene Components, Molecular Sequence Data, Multigene Family/*genetics, Physical Chromosome Mapping, Polyketide Synthases/*genetics/physiology, Sequence Analysis, DNA, Streptomyces aureofaciens/*genetics | Genetics |
| Metabolism | 15621415 | PHB synthase from Streptomyces aureofaciens NRRL 2209. | Ramachander TV, Rawal SK | FEMS Microbiol Lett | 10.1016/j.femsle.2004.10.034 | 2005 | Acyltransferases/*genetics/*metabolism, Amino Acid Motifs/genetics, Bacterial Proteins/genetics/metabolism, Base Composition, Chromosomes, Bacterial/genetics, Cloning, Molecular, DNA, Bacterial/chemistry, Escherichia coli/genetics/metabolism, Genes, Bacterial, Genes, Regulator, Molecular Sequence Data, Molecular Weight, Open Reading Frames, Promoter Regions, Genetic, Recombinant Proteins/genetics/metabolism, Sequence Analysis, DNA, Serine/genetics, Streptomyces aureofaciens/*enzymology/genetics | Enzymology |
| Metabolism | 16079347 | Characterization of a regulatory gene essential for the production of the angucycline-like polyketide antibiotic auricin in Streptomyces aureofaciens CCM 3239. | Novakova R, Homerova D, Feckova L, Kormanec J | Microbiology (Reading) | 10.1099/mic.0.28019-0 | 2005 | DNA, Bacterial/analysis/chemistry/genetics, Genes, Regulator/*genetics, Macrolides/*metabolism, Polyketide Synthases/metabolism, Streptomyces aureofaciens/*genetics/metabolism | Biotechnology |
| Metabolism | 20466770 | The role of the TetR-family transcriptional regulator Aur1R in negative regulation of the auricin gene cluster in Streptomyces aureofaciens CCM 3239. | Novakova R, Kutas P, Feckova L, Kormanec J | Microbiology (Reading) | 10.1099/mic.0.037895-0 | 2010 | Bacterial Proteins/genetics/*metabolism, Gene Expression Regulation, Bacterial, *Genes, Regulator, Macrolides/*metabolism, *Multigene Family, Mutation, Promoter Regions, Genetic, Protein Binding, RNA, Bacterial/genetics, Streptomyces aureofaciens/*genetics/metabolism, Transcription, Genetic | |
| Metabolism | 20490753 | Identification and characterization of an indigoidine-like gene for a blue pigment biosynthesis in Streptomyces aureofaciens CCM 3239. | Novakova R, Odnogova Z, Kutas P, Feckova L, Kormanec J | Folia Microbiol (Praha) | 10.1007/s12223-010-0018-5 | 2010 | Bacterial Proteins/*genetics/metabolism, *Gene Expression Regulation, Bacterial, Molecular Sequence Data, Pigments, Biological/*biosynthesis, Piperidones/*metabolism, Streptomyces aureofaciens/*genetics/metabolism | Genetics |
| Metabolism | 21393365 | The role of two SARP family transcriptional regulators in regulation of the auricin gene cluster in Streptomyces aureofaciens CCM 3239. | Novakova R, Rehakova A, Kutas P, Feckova L, Kormanec J | Microbiology (Reading) | 10.1099/mic.0.047795-0 | 2011 | Amino Acid Sequence, Bacterial Proteins/chemistry/genetics/metabolism, Base Sequence, *Gene Expression Regulation, Bacterial, Macrolides/*metabolism, Molecular Sequence Data, Multigene Family/*genetics/physiology, Mutation, Promoter Regions, Genetic, Repressor Proteins/chemistry/genetics/*metabolism, Sequence Analysis, DNA, Signal Transduction, Streptomyces aureofaciens/genetics/growth & development/*metabolism, Trans-Activators/chemistry/genetics/*metabolism | Genetics |
| Metabolism | 21584781 | Genetic manipulation of pathway regulation for overproduction of angucycline-like antibiotic auricin in Streptomyces aureofaciens CCM 3239. | Novakova R, Rehakova A, Feckova L, Kutas P, Knischova R, Kormanec J | Folia Microbiol (Praha) | 10.1007/s12223-011-0033-1 | 2011 | Anti-Bacterial Agents/*biosynthesis, Chromatography, High Pressure Liquid, DNA, Bacterial/genetics/metabolism, Gene Expression Regulation, Bacterial, Macrolides/*metabolism, Multigene Family, Plasmids/genetics, Promoter Regions, Genetic, Restriction Mapping, Streptomyces aureofaciens/*genetics/metabolism | Biotechnology |
| Metabolism | 23081778 | Strict control of auricin production in Streptomyces aureofaciens CCM 3239 involves a feedback mechanism. | Kutas P, Feckova L, Rehakova A, Novakova R, Homerova D, Mingyar E, Rezuchova B, Sevcikova B, Kormanec J | Appl Microbiol Biotechnol | 10.1007/s00253-012-4505-2 | 2012 | Anti-Bacterial Agents/*metabolism, Biosynthetic Pathways/genetics, *Feedback, Physiological, *Gene Expression Regulation, Bacterial, Macrolides/*metabolism, Streptomyces aureofaciens/*genetics/*metabolism, Transcription, Genetic | Biotechnology |
| Metabolism | 23373695 | The gene cluster aur1 for the angucycline antibiotic auricin is located on a large linear plasmid pSA3239 in Streptomyces aureofaciens CCM 3239. | Novakova R, Knirschova R, Farkasovsky M, Feckova L, Rehakova A, Mingyar E, Kormanec J | FEMS Microbiol Lett | 10.1111/1574-6968.12095 | 2013 | Anti-Bacterial Agents/*metabolism, Biosynthetic Pathways/*genetics, DNA, Bacterial/chemistry/genetics, Electrophoresis, Gel, Pulsed-Field, Macrolides/*metabolism, Molecular Sequence Data, *Multigene Family, *Plasmids, Sequence Analysis, DNA, Streptomyces aureofaciens/*genetics/*metabolism | Enzymology |
| Metabolism | 23763439 | A gene determining a new member of the SARP family contributes to transcription of genes for the synthesis of the angucycline polyketide auricin in Streptomyces aureofaciens CCM 3239. | Rehakova A, Novakova R, Feckova L, Mingyar E, Kormanec J | FEMS Microbiol Lett | 10.1111/1574-6968.12200 | 2013 | Amino Acid Sequence, Anti-Bacterial Agents/*metabolism, Binding Sites, Biosynthetic Pathways/genetics, DNA, Bacterial/genetics, *Gene Expression Regulation, Bacterial, Gene Knockout Techniques, Macrolides/*metabolism, Molecular Sequence Data, Polyketides/metabolism, Promoter Regions, Genetic, Sequence Alignment, Streptomyces aureofaciens/*genetics/*metabolism, Transcription Factors/genetics/*metabolism, *Transcription, Genetic | Genetics |
| Metabolism | 24265028 | Intriguing properties of the angucycline antibiotic auricin and complex regulation of its biosynthesis. | Kormanec J, Novakova R, Mingyar E, Feckova L | Appl Microbiol Biotechnol | 10.1007/s00253-013-5373-0 | 2013 | Anti-Bacterial Agents/*metabolism/*pharmacology, Biosynthetic Pathways/*genetics, *Gene Expression Regulation, Bacterial, Macrolides/*metabolism/*pharmacology, Multigene Family, Plasmids, Streptomyces aureofaciens/genetics/growth & development/*metabolism | |
| Metabolism | 25219533 | A gamma-butyrolactone autoregulator-receptor system involved in the regulation of auricin production in Streptomyces aureofaciens CCM 3239. | Mingyar E, Feckova L, Novakova R, Bekeova C, Kormanec J | Appl Microbiol Biotechnol | 10.1007/s00253-014-6057-0 | 2014 | Anti-Bacterial Agents/*metabolism, Bacterial Proteins/genetics/metabolism, Gene Expression Profiling, *Gene Expression Regulation, Bacterial, Macrolides/*metabolism, Streptomyces aureofaciens/*genetics/*metabolism, Transcription, Genetic | Biotechnology |
| Metabolism | 25801098 | Utilization of a reporter system based on the blue pigment indigoidine biosynthetic gene bpsA for detection of promoter activity and deletion of genes in Streptomyces. | Knirschova R, Novakova R, Mingyar E, Bekeova C, Homerova D, Kormanec J | J Microbiol Methods | 10.1016/j.mimet.2015.03.017 | 2015 | *Genes, Bacterial, *Genes, Reporter, Peptide Synthases/genetics, Piperidones/*metabolism, Plasmids, *Promoter Regions, Genetic, Recombination, Genetic, *Sequence Deletion, Streptomyces aureofaciens/enzymology/*genetics | Enzymology |
| Metabolism | 26685675 | Characterisation of the genes involved in the biosynthesis and attachment of the aminodeoxysugar D-forosamine in the auricin gene cluster of Streptomyces aureofaciens CCM3239. | Bekeova C, Rehakova A, Feckova L, Vlckova S, Novakova R, Mingyar E, Kormanec J | Appl Microbiol Biotechnol | 10.1007/s00253-015-7214-9 | 2015 | Anti-Bacterial Agents/*biosynthesis, Bacterial Proteins/genetics/metabolism, Base Sequence, Gene Deletion, *Gene Expression Regulation, Bacterial, Hexosamines/*biosynthesis, Macrolides/*metabolism, Multigene Family, Operon, Promoter Regions, Genetic, Secondary Metabolism/genetics, Sequence Alignment, Streptomyces aureofaciens/*genetics/metabolism, Transaminases/*genetics/metabolism | |
| Transcriptome | 29155332 | Unusual features of the large linear plasmid pSA3239 from Streptomyces aureofaciens CCM 3239. | Mingyar E, Novakova R, Knirschova R, Feckova L, Bekeova C, Kormanec J | Gene | 10.1016/j.gene.2017.11.046 | 2017 | Bacterial Proteins/*genetics, Base Sequence, Biosynthetic Pathways, Genome Size, Multigene Family, Open Reading Frames, Plasmids/*genetics, Sequence Analysis, DNA/*methods, Streptomyces aureofaciens/*genetics | Genetics |
| Genetics | 29496832 | Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly "Streptomyces aureofaciens CCM 3239"), a Producer of the Angucycline-Type Antibiotic Auricin. | Busche T, Novakova R, Al'Dilaimi A, Homerova D, Feckova L, Rezuchova B, Mingyar E, Csolleiova D, Bekeova C, Winkler A, Sevcikova B, Kalinowski J, Kormanec J, Ruckert C | Genome Announc | 10.1128/genomeA.00103-18 | 2018 | ||
| Pathogenicity | 29842823 | Rapid identification of Streptomyces tetracycline producers by MALDI-TOF mass spectrometry. | Hleba L, Charousova I, Cisarova M, Kovacik A, Kormanec J, Medo J, Bozik M, Javorekova S | J Environ Sci Health A Tox Hazard Subst Environ Eng | 10.1080/10934529.2018.1474581 | 2018 | Databases, Factual, High-Throughput Screening Assays/methods, Humans, Software, *Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Streptomyces/*isolation & purification/*metabolism, Tetracycline/chemistry/isolation & purification/*metabolism | Enzymology |
| Metabolism | 31240365 | Heterologous production of chlortetracycline in an industrial grade Streptomyces rimosus host. | Wang X, Yin S, Bai J, Liu Y, Fan K, Wang H, Yuan F, Zhao B, Li Z, Wang W | Appl Microbiol Biotechnol | 10.1007/s00253-019-09970-1 | 2019 | Anti-Infective Agents/*metabolism, Biosynthetic Pathways/*genetics, Chlortetracycline/*biosynthesis, Cloning, Molecular, Gene Deletion, Metabolic Engineering/*methods, Multigene Family, Recombination, Genetic, Streptomyces aureofaciens/genetics, Streptomyces rimosus/genetics/*metabolism | Enzymology |
| 31349574 | A Structural Analysis of the Angucycline-Like Antibiotic Auricin from Streptomyces lavendulae Subsp. Lavendulae CCM 3239 Revealed Its High Similarity to Griseusins. | Matulova M, Feckova L, Novakova R, Mingyar E, Csolleiova D, Zduriencikova M, Sedlak J, Patoprsty V, Sasinkova V, Uhliarikova I, Sevcikova B, Rezuchova B, Homerova D, Kormanec J | Antibiotics (Basel) | 10.3390/antibiotics8030102 | 2019 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9330 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40127) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40127 | |||
| 19405 | Wink, J. | http://www.dsmz.de/microorganisms/wink_pdf/DSM40127.pdf | Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 37599 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/9594 | ||||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 68368 | Automatically annotated from API 20E | |||||
| 68379 | Automatically annotated from API Coryne | |||||
| 68382 | Automatically annotated from API zym | |||||
| 69247 | Wink, J. | https://cdn.dsmz.de/wink/DSM%2040127.pdf | Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig | |||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
| 84122 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID389336.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
| 116569 | Curators of the CIP | Collection of Institut Pasteur (CIP 57.11) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2057.11 |