Strain identifier
BacDive ID: 15009
Type strain:
Species: Streptomyces aurantiacus
Strain history: KCC S-0135 <-- R. Shinobu <-- H. Nishimura <-- ATCC 3003 <-- S. A. Waksman 367.
NCBI tax ID(s): 58341 (species)
General
@ref: 9802
BacDive-ID: 15009
DSM-Number: 40795
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces aurantiacus DSM 40795 is a mesophilic bacterium that was isolated from Soil.
NCBI tax id
- NCBI tax id: 58341
- Matching level: species
strain history
@ref | history |
---|---|
9802 | <- NRRL |
67770 | KCC S-0135 <-- R. Shinobu <-- H. Nishimura <-- ATCC 3003 <-- S. A. Waksman 367. |
doi: 10.13145/bacdive15009.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces aurantiacus
- full scientific name: Streptomyces aurantiacus (Rossi Doria 1891) Waksman 1953 (Approved Lists 1980)
synonyms
@ref synonym 20215 Actinomyces albosporeus 20215 Actinomyces glomeroaurantiacus 20215 Streptomyces glomeroaurantiacus 20215 Streptotrix aurantiaca 20215 Streptomyces albosporeus
@ref: 9802
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces aurantiacus
full scientific name: Streptomyces aurantiacus (Rossi Doria 1891) Waksman 1953 emend. Lanoot et al. 2002
type strain: no
Morphology
multimedia
- @ref: 9802
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40795.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
9802 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
9802 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
9802 | positive | growth | 28 | mesophilic |
67770 | positive | growth | 28 | mesophilic |
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil
taxonmaps
- @ref: 69479
- File name: preview.99_6865.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_91;97_97;98_928;99_6865&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: AB184637
- Sequence Identity:
- Total samples: 244
- soil counts: 120
- aquatic counts: 9
- animal counts: 107
- plant counts: 8
Safety information
risk assessment
- @ref: 9802
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Streptomyces aurantiacus gene for 16S rRNA, partial sequence, strain: NBRC 15386 | AB184637 | 1444 | ena | 47760 |
20218 | Streptomyces albosporeus subsp. albosporeus 16S rRNA gene, type strain LMG 19403 | AJ781327 | 1479 | ena | 47760 |
20218 | Streptomyces aurantiacus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4135 | D44013 | 121 | ena | 47760 |
20218 | Streptomyces albosporeus subsp. albosporeus 16S-23S ribosomal RNA gene spacer, partial sequence | U93343 | 270 | ena | 47760 |
External links
@ref: 9802
culture collection no.: DSM 40795, ATCC 15394, ATCC 3003, CCM 3157, CGMCC AS 4.1396, IFO 15386, IMRU 3003, JCM 4135, KCC S-0135, LMG 19403, NBRC 15386, NRRL B-2372, VKM Ac-818, Waksman 367, CGMCC 4.1396, CGMCC 4.1599, IFM 1163, KCTC 9665, NRRL B-1239, RIA 482, VKM Ac-1818
straininfo link
- @ref: 84117
- straininfo: 386988
literature
- topic: Phylogeny
- Pubmed-ID: 12054245
- title: The search for synonyms among streptomycetes by using SDS-PAGE of whole-cell proteins. Emendation of the species Streptomyces aurantiacus, Streptomyces cacaoi subsp. cacaoi, Streptomyces caeruleus and Streptomyces violaceus.
- authors: Lanoot B, Vancanneyt M, Cleenwerck I, Wang L, Li W, Liu Z, Swings J
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/00207713-52-3-823
- year: 2002
- mesh: Bacterial Proteins/*analysis, Bacterial Typing Techniques, Electrophoresis, Polyacrylamide Gel, Nucleic Acid Hybridization, Phenotype, Species Specificity, Streptomyces/*chemistry/*classification/genetics
- topic2: Enzymology
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
9802 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40795) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40795 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
84117 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID386988.1 | StrainInfo: A central database for resolving microbial strain identifiers |