Strain identifier

BacDive ID: 15009

Type strain: No

Species: Streptomyces aurantiacus

Strain history: KCC S-0135 <-- R. Shinobu <-- H. Nishimura <-- ATCC 3003 <-- S. A. Waksman 367.

NCBI tax ID(s): 58341 (species)

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General

@ref: 9802

BacDive-ID: 15009

DSM-Number: 40795

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces aurantiacus DSM 40795 is a mesophilic bacterium that was isolated from Soil.

NCBI tax id

  • NCBI tax id: 58341
  • Matching level: species

strain history

@refhistory
9802<- NRRL
67770KCC S-0135 <-- R. Shinobu <-- H. Nishimura <-- ATCC 3003 <-- S. A. Waksman 367.

doi: 10.13145/bacdive15009.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces aurantiacus
  • full scientific name: Streptomyces aurantiacus (Rossi Doria 1891) Waksman 1953 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Actinomyces albosporeus
    20215Actinomyces glomeroaurantiacus
    20215Streptomyces glomeroaurantiacus
    20215Streptotrix aurantiaca
    20215Streptomyces albosporeus

@ref: 9802

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces aurantiacus

full scientific name: Streptomyces aurantiacus (Rossi Doria 1891) Waksman 1953 emend. Lanoot et al. 2002

type strain: no

Morphology

multimedia

  • @ref: 9802
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40795.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9802GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9802ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf

culture temp

@refgrowthtypetemperaturerange
9802positivegrowth28mesophilic
67770positivegrowth28mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_6865.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_91;97_97;98_928;99_6865&stattab=map
  • Last taxonomy: Streptomyces
  • 16S sequence: AB184637
  • Sequence Identity:
  • Total samples: 244
  • soil counts: 120
  • aquatic counts: 9
  • animal counts: 107
  • plant counts: 8

Safety information

risk assessment

  • @ref: 9802
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces aurantiacus gene for 16S rRNA, partial sequence, strain: NBRC 15386AB1846371444ena47760
20218Streptomyces albosporeus subsp. albosporeus 16S rRNA gene, type strain LMG 19403AJ7813271479ena47760
20218Streptomyces aurantiacus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4135D44013121ena47760
20218Streptomyces albosporeus subsp. albosporeus 16S-23S ribosomal RNA gene spacer, partial sequenceU93343270ena47760

External links

@ref: 9802

culture collection no.: DSM 40795, ATCC 15394, ATCC 3003, CCM 3157, CGMCC AS 4.1396, IFO 15386, IMRU 3003, JCM 4135, KCC S-0135, LMG 19403, NBRC 15386, NRRL B-2372, VKM Ac-818, Waksman 367, CGMCC 4.1396, CGMCC 4.1599, IFM 1163, KCTC 9665, NRRL B-1239, RIA 482, VKM Ac-1818

straininfo link

  • @ref: 84117
  • straininfo: 386988

literature

  • topic: Phylogeny
  • Pubmed-ID: 12054245
  • title: The search for synonyms among streptomycetes by using SDS-PAGE of whole-cell proteins. Emendation of the species Streptomyces aurantiacus, Streptomyces cacaoi subsp. cacaoi, Streptomyces caeruleus and Streptomyces violaceus.
  • authors: Lanoot B, Vancanneyt M, Cleenwerck I, Wang L, Li W, Liu Z, Swings J
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/00207713-52-3-823
  • year: 2002
  • mesh: Bacterial Proteins/*analysis, Bacterial Typing Techniques, Electrophoresis, Polyacrylamide Gel, Nucleic Acid Hybridization, Phenotype, Species Specificity, Streptomyces/*chemistry/*classification/genetics
  • topic2: Enzymology

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9802Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40795)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40795
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
84117Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID386988.1StrainInfo: A central database for resolving microbial strain identifiers