Strain identifier

BacDive ID: 15003

Type strain: No

Species: Streptomyces arenae

Strain Designation: Tü 495

Strain history: <- H. Zähner, Tü 495

NCBI tax ID(s): 29301 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 9740

BacDive-ID: 15003

DSM-Number: 40737

keywords: genome sequence, Bacteria, mesophilic

description: Streptomyces arenae Tü 495 is a mesophilic bacterium of the family Streptomycetaceae.

NCBI tax id

  • NCBI tax id: 29301
  • Matching level: species

strain history

  • @ref: 9740
  • history: <- H. Zähner, Tü 495

doi: 10.13145/bacdive15003.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces arenae
  • full scientific name: Streptomyces arenae Pridham et al. 1958 (Approved Lists 1980)

@ref: 9740

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces arenae

full scientific name: Streptomyces arenae Pridham et al. 1958

strain designation: Tü 495

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9740GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9740ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf

culture temp

  • @ref: 9740
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

compound production

  • @ref: 9740
  • compound: naphthocyclinone

Safety information

risk assessment

  • @ref: 9740
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Streptomyces arenae DSM407372582581528draftimg29301
66792Streptomyces arenae DSM407372582581527draftimg29301
66792Streptomyces arenae DSM 40737GCA_022343545scaffoldncbi29301

External links

@ref: 9740

culture collection no.: DSM 40737

straininfo link

  • @ref: 84111
  • straininfo: 49782

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Enzymology10206788Isolation and characterization of the naphthocyclinone gene cluster from Streptomyces arenae DSM 40737 and heterologous expression of the polyketide synthase genes.Brunker P, McKinney K, Sterner O, Minas W, Bailey JEGene10.1016/s0378-1119(98)00618-01999Amino Acid Sequence, Bacterial Proteins/genetics, Chromosome Mapping, Cloning, Molecular, Drug Resistance/genetics, Gene Expression Regulation, Bacterial/genetics, Genes, Bacterial/genetics, Molecular Sequence Data, Molecular Structure, Multienzyme Complexes/*genetics, Naphthalenes/metabolism, Open Reading Frames/genetics, Plasmids/genetics, Sequence Analysis, DNA, Streptomyces/enzymology/*geneticsGenetics
Enzymology11816965Heterologous expression of the naphthocyclinone hydroxylase gene from Streptomyces arenae for production of novel hybrid polyketides.Brunke P, Sterner O, Bailey JE, Minas WAntonie Van Leeuwenhoek10.1023/a:10120373299492001Amino Acid Sequence, Anthraquinones/chemistry/metabolism/pharmacology, Bacillus subtilis/drug effects, Cloning, Molecular, Escherichia coli/drug effects/enzymology/genetics, Genes, Bacterial, Magnetic Resonance Spectroscopy, Mixed Function Oxygenases/chemistry/*genetics/*metabolism, Molecular Sequence Data, Multigene Family, Naphthalenes/chemistry/*metabolism, Sequence Analysis, DNA, Streptomyces/*enzymology/geneticsMetabolism

Reference

@idauthorscataloguedoi/urltitle
9740Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40737)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40737
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
84111Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49782.1StrainInfo: A central database for resolving microbial strain identifiers