Strain identifier
BacDive ID: 14941
Type strain: 
Species: Streptomyces noursei
Strain Designation: BA 4105
Strain history: KCC S-0718 <-- IFO 13410 <-- SAJ <-- ISP 5492 <-- ATCC 12757 <-- Chas. Pfizer & Co.; BA 4105.
NCBI tax ID(s): 1971 (species)
version 9.1 (current version)
General
@ref: 9597
BacDive-ID: 14941
DSM-Number: 40492
keywords: genome sequence, 16S sequence, Bacteria, spore-forming, antibiotic compound production
description: Streptomyces noursei BA 4105 is a spore-forming bacterium that produces antibiotic compounds and was isolated from Soil.
NCBI tax id
- NCBI tax id: 1971
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9597 | <- E.B. Shirling, ISP <- ATCC <- Chas. Pfizer & Co., BA 4105 |
| 67770 | KCC S-0718 <-- IFO 13410 <-- SAJ <-- ISP 5492 <-- ATCC 12757 <-- Chas. Pfizer & Co.; BA 4105. |
doi: 10.13145/bacdive14941.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces noursei
- full scientific name: Streptomyces noursei Brown et al. 1953 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Streptomyces albulus
@ref: 9597
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces albulus
full scientific name: Streptomyces albulus Routien 1969
strain designation: BA 4105
type strain: yes
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9597 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9597 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 9597 | positive | growth | 37 |
| 67770 | positive | growth | 28 |
Physiology and metabolism
oxygen tolerance
- @ref: 69480
- oxygen tolerance: aerobe
- confidence: 91.005
compound production
| @ref | compound |
|---|---|
| 9597 | acetoxycycloheximide |
| 9597 | desacetyl-dehydro acetoxycycloheximide (aciphenol) |
| 9597 | albanoursin |
| 9597 | anti-tumor antibiotic E-73 |
| 9597 | cycloheximide |
| 9597 | fungicidin |
| 9597 | cycloheximide diastereo-isomers |
| 9597 | dihydro E-73 |
| 67770 | Antitumor antibiotic E-73 |
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil
Safety information
risk assessment
- @ref: 9597
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces albulus strain CGMCC 4.1585 16S ribosomal RNA gene, partial sequence | JN566022 | 1373 | nuccore | 68570 |
| 20218 | Streptomyces noursei DNA for 16S ribosomal RNA, strain:IMC S-0802, partial sequence | AB024440 | 1488 | nuccore | 68570 |
| 20218 | Streptomyces noursei gene for 16S ribosomal RNA, partial sequence, strain: JCM 4718 | D44308 | 121 | nuccore | 68570 |
| 20218 | Streptomyces noursei gene for 16S rRNA, partial sequence, strain: NBRC 13410 | AB184384 | 1469 | nuccore | 68570 |
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Streptomyces noursei JCM 4718 | GCA_014650635 | scaffold | ncbi | 1971 |
| 66792 | Streptomyces albulus strain JCM 4718 | 68570.25 | wgs | patric | 68570 |
| 66792 | Streptomyces noursei ATCC 12757 | GCA_026913165 | scaffold | ncbi | 1971 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 89.795 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 96.826 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 91.005 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 89.569 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 95.5 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 87.767 | no |
External links
@ref: 9597
culture collection no.: DSM 40492, ATCC 12757, CBS 711.72, IFO 13410, ISP 5492, NBRC 13410, RIA 1371, JCM 4718, BCRC 11819, CGMCC 4.1585, KCTC 9668, MTCC 503, NRRL B-5386
straininfo link
- @ref: 84050
- straininfo: 45527
literature
- topic: Phylogeny
- Pubmed-ID: 19060056
- title: Streptomyces lunalinharesii sp. nov., a chitinolytic streptomycete isolated from cerrado soil in Brazil.
- authors: de Souza RF, Coelho RR, Macrae A, Soares RM, Nery Dda C, Semedo LT, Alviano CS, Gomes RC
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.65768-0
- year: 2008
- mesh: Brazil, Chitin/*metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, *Soil Microbiology, Species Specificity, Streptomyces/*classification/genetics/*physiology
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9597 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40492) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40492 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 84050 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID45527.1 | StrainInfo: A central database for resolving microbial strain identifiers |