Strain identifier

BacDive ID: 149222

Type strain: No

Species: Capnocytophaga canimorsus

NCBI tax ID(s): 28188 (species)

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General

@ref: 53583

BacDive-ID: 149222

keywords: Bacteria

description: Capnocytophaga canimorsus CCUG 37293 is a bacterium that was isolated from Human blood,animal bite,sepsis.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive149222.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 53583

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase+3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53583C14:01.314
    53583C15:00.315
    53583C16:014.116
    53583C17:00.217
    53583C18:03.218
    53583C13:0 iso0.412.612
    53583C13:1 at 12-131.712.931
    53583C14:0 3OH/C16:1 ISO I0.715.485
    53583C15:0 ANTEISO1.314.711
    53583C15:0 ISO45.514.621
    53583C15:0 ISO 3OH4.316.135
    53583C16:0 3OH2.517.52
    53583C16:0 iso0.315.626
    53583C16:1 ω7c0.915.819
    53583C16:1 ω9c0.215.774
    53583C17:0 iso0.316.629
    53583C17:0 iso 3OH4.918.161
    53583C17:1 ω5c ISO0.216.461
    53583C18:0 3OH0.219.551
    53583C18:1 ω9c2.717.769
    53583C18:2 ω6,9c/C18:0 ANTE6.117.724
    53583C20:4 ω6,9,12,15c0.219.395
    53583Unidentified0.215.947
    53583Unidentified3.817.791
    53583unknown 11.5410.611.541
    53583unknown 13.566413.566
    53583unknown 16.5800.316.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
53583-+++-++-+-+----+-+-+

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
53583-++++---++---

Isolation, sampling and environmental information

isolation

  • @ref: 53583
  • sample type: Human blood,animal bite,sepsis
  • sampling date: 1996-12-12
  • geographic location: Västerås
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood
#Infection#Inflammation
#Infection#Patient

External links

@ref: 53583

culture collection no.: CCUG 37293

straininfo link

  • @ref: 103664
  • straininfo: 52520

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53583Curators of the CCUGhttps://www.ccug.se/strain?id=37293Culture Collection University of Gothenburg (CCUG) (CCUG 37293)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
103664Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID52520.1