Strain identifier

BacDive ID: 148752

Type strain: No

Species: Campylobacter pylori

NCBI tax ID(s): 210 (species)

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General

@ref: 53080

BacDive-ID: 148752

keywords: Bacteria

description: Campylobacter pylori CCUG 35899 is a bacterium that was isolated from Human biopsy.

NCBI tax id

  • NCBI tax id: 210
  • Matching level: species

doi: 10.13145/bacdive148752.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Campylobacteraceae
  • genus: Campylobacter
  • species: Campylobacter pylori
  • full scientific name: Campylobacter pylori corrig. Marshall et al. 1985

  • synonyms

    @refsynonym
    20215Campylobacter pyloridis
    20215Helicobacter pylori
    20215Helicobacter nemestrinae

@ref: 53080

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Helicobacteraceae

genus: Helicobacter

species: Helicobacter pylori

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837316199urea+hydrolysis
6837317632nitrate-reduction
68373606565hippurate-hydrolysis
6837378019triphenyltetrazolium chloride+reduction
6837317634D-glucose-assimilation
6837330031succinate-assimilation
6837330089acetate-assimilation
6837317272propionate-assimilation
6837325115malate-assimilation
6837316947citrate-assimilation

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.
6837348923erythromycinyesyes14 µg
68373474053cefazolinyesyes224 µg
68373100147nalidixic acidyesyes84 µg

metabolite production

  • @ref: 68373
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: no

enzymes

@refvalueactivityec
68373catalase+1.11.1.6
68373alkaline phosphatase+3.1.3.1
68373L-aspartate arylamidase-3.4.11.21
68373L-arginine arylamidase+
68373pyrrolidonyl arylamidase-3.4.19.3
68373gamma-glutamyltransferase+2.3.2.2
68373esterase+
68373urease+3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53080C12:00.712
    53080C13:00.413
    53080C14:051.614
    53080C15:00.815
    53080C16:01.416
    53080C18:04.118
    53080C19:00.319
    53080C13:0 ISO 2OH0.313.814
    53080C13:1 at 12-130.312.931
    53080C16:0 3OH2.717.52
    53080C17:0 3OH0.318.535
    53080C18:0 3OH2.919.551
    53080C18:1 ω7c /12t/9t7.917.824
    53080C18:2 ω6,9c/C18:0 ANTE0.617.724
    53080C19:0 CYCLO ω8c24.918.9
    53080Unidentified0.614.952
    53080Unidentified0.317.939
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API CAM

@refURENITESTHIPGGTTTCPYRAArgAAspAPALH2SGLUSUTNALCFZACEPROPMLTCITEROCAT
53080+-+-++-+-+----------+

Isolation, sampling and environmental information

isolation

  • @ref: 53080
  • sample type: Human biopsy
  • sampling date: 1995-02-01
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Infection#Patient#Biopsy

External links

@ref: 53080

culture collection no.: CCUG 35899

straininfo link

  • @ref: 103254
  • straininfo: 54669

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53080Curators of the CCUGhttps://www.ccug.se/strain?id=35899Culture Collection University of Gothenburg (CCUG) (CCUG 35899)
68373Automatically annotated from API CAM
103254Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID54669.1