Strain identifier
version 8.1 (current version)
General
@ref: 53056
BacDive-ID: 148728
keywords: Bacteria
description: Burkholderia vietnamiensis CCUG 35865 is a bacterium that was isolated from Human sputum,17-yr-old,cystic fibrosis.
NCBI tax id
- NCBI tax id: 60552
- Matching level: species
doi: 10.13145/bacdive148728.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Burkholderiaceae
- genus: Burkholderia
- species: Burkholderia vietnamiensis
- full scientific name: Burkholderia vietnamiensis Gillis et al. 1995
@ref: 53056
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Burkholderiaceae
genus: Burkholderia
species: Burkholderia vietnamiensis
type strain: no
Physiology and metabolism
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | - | assimilation |
68369 | 27689 | decanoate | + | assimilation |
68369 | 24265 | gluconate | + | assimilation |
68369 | 17306 | maltose | - | assimilation |
68369 | 59640 | N-acetylglucosamine | + | assimilation |
68369 | 16899 | D-mannitol | - | assimilation |
68369 | 16024 | D-mannose | - | assimilation |
68369 | 30849 | L-arabinose | - | assimilation |
68369 | 17634 | D-glucose | + | assimilation |
68369 | 5291 | gelatin | - | hydrolysis |
68369 | 4853 | esculin | - | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | - | hydrolysis |
68369 | 17634 | D-glucose | - | fermentation |
68369 | 27897 | tryptophan | - | energy source |
68369 | 17632 | nitrate | + | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68369 | cytochrome oxidase | + | 1.9.3.1 |
68369 | gelatinase | - | |
68369 | beta-glucosidase | - | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 53056 C14:0 4.9 14 53056 C15:0 0.4 15 53056 C16:0 21.5 16 53056 C17:0 0.3 17 53056 C18:0 0.4 18 53056 C14:0 2OH 0.5 15.205 53056 C14:0 3OH/C16:1 ISO I 5.3 15.485 53056 C15:1 ω6c 0.4 14.856 53056 C16:0 2OH 1.2 17.233 53056 C16:0 3OH 4.9 17.52 53056 C16:1 2OH 1.9 17.047 53056 C16:1 ω5c 0.3 15.908 53056 C16:1 ω7c 19.2 15.819 53056 C17:0 CYCLO 7.6 16.888 53056 C18:1 2OH 4.3 19.088 53056 C18:1 ω7c /12t/9t 25.6 17.824 53056 C18:2 ω6,9c/C18:0 ANTE 0.4 17.724 53056 C19:0 CYCLO ω8c 1.1 18.9 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
53056 | + | - | - | - | - | - | - | - | + | - | - | - | + | - | + | + | - | + | + | + | + |
Isolation, sampling and environmental information
isolation
- @ref: 53056
- sample type: Human sputum,17-yr-old,cystic fibrosis
- sampling date: 1996-05-14
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | |
#Host Body Product | #Fluids | #Sputum |
#Infection | #Disease | #Cystic fibrosis |
#Infection | #Patient | |
#Host | #Human | #Child |
External links
@ref: 53056
culture collection no.: CCUG 35865
straininfo link
- @ref: 103233
- straininfo: 52144
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
53056 | Curators of the CCUG | https://www.ccug.se/strain?id=35865 | Culture Collection University of Gothenburg (CCUG) (CCUG 35865) | |
68369 | Automatically annotated from API 20NE | |||
103233 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID52144.1 |