Strain identifier

BacDive ID: 148580

Type strain: No

Species: Gordonia sputi

NCBI tax ID(s): 36823 (species)

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General

@ref: 52900

BacDive-ID: 148580

keywords: Bacteria

description: Gordonia sputi CCUG 35666 is a bacterium that was isolated from Human sputum.

NCBI tax id

  • NCBI tax id: 36823
  • Matching level: species

doi: 10.13145/bacdive148580.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Gordoniaceae
  • genus: Gordonia
  • species: Gordonia sputi
  • full scientific name: Gordonia sputi corrig. (Tsukamura and Yano 1985 ex Tsukamura 1978) Stackebrandt et al. 1989

  • synonyms

    @refsynonym
    20215Rhodococcus sputi
    20215Gordona sputi

@ref: 52900

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Gordoniaceae

genus: Gordonia

species: Gordonia sputi

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin+hydrolysis
6837916199urea+hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease+3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • @reffatty acidpercentageECL
    52900C10:00.910
    52900C14:04.714
    52900C16:031.916
    52900C18:05.518
    52900C16:0 anteiso1.715.717
    52900C16:1 ω7c alcohol1.115.386
    52900C16:1 ω7c/C15:0 ISO 2OH17.915.85
    52900C18:1 ω9c15.317.769
    52900C18:2 ω6,9c/C18:0 ANTE8.917.724
    52900TBSA 10Me18:09.318.392
    52900Unidentified113.242
    52900Unidentified1.918.212
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG
  • @reffatty acidpercentageECL
    52900C10:00.510
    52900C12:00.512
    52900C14:03.614
    52900C15:00.415
    52900C16:033.216
    52900C18:04.818
    52900C14:0 ANTEISO0.313.707
    52900C16:0 anteiso0.815.717
    52900C16:1 ω7c/C15:0 ISO 2OH14.815.85
    52900C16:1 ω9c0.515.774
    52900C17:1 ω9c0.616.773
    52900C18:1 ω9c16.817.769
    52900C18:2 ω6,9c/C18:0 ANTE5.917.724
    52900TBSA 10Me18:015.918.392
    52900Unidentified0.313.237
    52900Unidentified0.418.712
    52900Unidentified119.702
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
52900++-+--+-++--+-----+-+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52900-+++++----++---++---

Isolation, sampling and environmental information

isolation

  • @ref: 52900
  • sample type: Human sputum
  • sampling date: 1996-03-14
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Sputum

External links

@ref: 52900

culture collection no.: CCUG 35666

straininfo link

  • @ref: 103117
  • straininfo: 54174

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52900Curators of the CCUGhttps://www.ccug.se/strain?id=35666Culture Collection University of Gothenburg (CCUG) (CCUG 35666)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
103117Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID54174.1