Strain identifier
version 8.1 (current version)
General
@ref: 52836
BacDive-ID: 148518
keywords: Bacteria
description: Carnobacterium sp. CCUG 35583 is a bacterium that was isolated from Human blood.
NCBI tax id
- NCBI tax id: 48221
- Matching level: species
doi: 10.13145/bacdive148518.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Carnobacteriaceae
- genus: Carnobacterium
- species: Carnobacterium sp.
- full scientific name: Carnobacterium Collins et al. 1987
@ref: 52836
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Carnobacteriaceae
genus: Carnobacterium
species: Carnobacterium sp.
type strain: no
Physiology and metabolism
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68379 | 17632 | nitrate | - | reduction |
68379 | 4853 | esculin | + | hydrolysis |
68379 | 16199 | urea | - | hydrolysis |
68379 | 5291 | gelatin | - | hydrolysis |
68379 | 17634 | D-glucose | + | fermentation |
68379 | 16988 | D-ribose | + | fermentation |
68379 | 65327 | D-xylose | - | fermentation |
68379 | 16899 | D-mannitol | - | fermentation |
68379 | 17306 | maltose | + | fermentation |
68379 | 17716 | lactose | + | fermentation |
68379 | 17992 | sucrose | + | fermentation |
68379 | 28087 | glycogen | - | fermentation |
68376 | 4853 | esculin | + | hydrolysis |
68376 | 18333 | D-arabitol | - | builds acid from |
68376 | 65327 | D-xylose | - | builds acid from |
68376 | 62345 | L-rhamnose | - | builds acid from |
68376 | 320061 | methyl alpha-D-glucopyranoside | - | builds acid from |
68376 | 16988 | D-ribose | + | builds acid from |
68376 | 29042 | glucose 1-phosphate | - | builds acid from |
68376 | 16443 | D-tagatose | - | builds acid from |
68381 | 29016 | arginine | + | hydrolysis |
68381 | 16988 | D-ribose | + | builds acid from |
68381 | 16899 | D-mannitol | - | builds acid from |
68381 | 30911 | sorbitol | - | builds acid from |
68381 | 17716 | lactose | - | builds acid from |
68381 | 27082 | trehalose | + | builds acid from |
68381 | 16634 | raffinose | - | builds acid from |
68381 | 17992 | sucrose | + | builds acid from |
68381 | 30849 | L-arabinose | - | builds acid from |
68381 | 18333 | D-arabitol | - | builds acid from |
68381 | 40585 | alpha-cyclodextrin | + | builds acid from |
68381 | 606565 | hippurate | - | hydrolysis |
68381 | 28087 | glycogen | - | builds acid from |
68381 | 27941 | pullulan | - | builds acid from |
68381 | 17306 | maltose | + | builds acid from |
68381 | 28053 | melibiose | - | builds acid from |
68381 | 6731 | melezitose | - | builds acid from |
68381 | 320055 | methyl beta-D-glucopyranoside | + | builds acid from |
68381 | 16443 | D-tagatose | - | builds acid from |
68381 | 16199 | urea | - | hydrolysis |
metabolite production
- @ref: 68381
- Chebi-ID: 15688
- metabolite: acetoin
- production: yes
metabolite tests
- @ref: 68381
- Chebi-ID: 15688
- metabolite: acetoin
- voges-proskauer-test: +
enzymes
@ref | value | activity | ec |
---|---|---|---|
68381 | urease | - | 3.5.1.5 |
68381 | beta-mannosidase | + | 3.2.1.25 |
68381 | glycyl tryptophan arylamidase | + | |
68381 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68381 | pyrrolidonyl arylamidase | + | 3.4.19.3 |
68381 | beta-galactosidase | - | 3.2.1.23 |
68381 | Alanyl-Phenylalanyl-Proline arylamidase | - | |
68381 | alkaline phosphatase | - | 3.1.3.1 |
68381 | alpha-galactosidase | - | 3.2.1.22 |
68381 | beta-glucuronidase | - | 3.2.1.31 |
68381 | beta-glucosidase | + | 3.2.1.21 |
68381 | arginine dihydrolase | + | 3.5.3.6 |
68376 | alpha-mannosidase | - | 3.2.1.24 |
68376 | beta-glucosidase | + | 3.2.1.21 |
68379 | catalase | + | 1.11.1.6 |
68379 | gelatinase | - | |
68379 | urease | - | 3.5.1.5 |
68379 | beta-glucosidase | + | 3.2.1.21 |
68379 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68379 | alpha-glucosidase | - | 3.2.1.20 |
68379 | beta-galactosidase | - | 3.2.1.23 |
68379 | beta-glucuronidase | - | 3.2.1.31 |
68379 | alkaline phosphatase | + | 3.1.3.1 |
68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 |
68379 | pyrazinamidase | + | 3.5.1.B15 |
68382 | alkaline phosphatase | - | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | - | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucosidase | + | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 52836 C14:0 10.3 14 52836 C16:0 21.2 16 52836 C18:0 3 18 52836 C15:1 ISO F 0.5 14.414 52836 C16:1 ω7c/C15:0 ISO 2OH 3.4 15.85 52836 C16:1 ω9c 13.8 15.774 52836 C17:1 ω5c ISO 0.9 16.461 52836 C17:1 ω9c ISO 1 16.416 52836 C18:1 ω9c 17.1 17.769 52836 C18:2 ω6,9c/C18:0 ANTE 4 17.724 52836 C19:0 CYCLO ω9c 14.4 18.87 52836 C19:1 ISO I 0.9 18.473 52836 C20:1 ω9c 1 19.77 52836 C20:2 ω6,9c 0.8 19.735 52836 Unidentified 0.9 13.244 52836 Unidentified 0.9 13.774 52836 Unidentified 4.1 13.858 52836 Unidentified 0.8 16.166 52836 Unidentified 1 18.195 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API coryne
@ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
52836 | - | + | + | + | - | - | - | + | + | - | - | - | + | + | - | - | + | + | + | - | + |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
52836 | - | - | + | + | - | - | - | - | - | - | + | + | - | - | - | + | + | - | - | - |
API LIST
@ref | DIM | ESC | alpha MAN | DARL | XYL | RHA | MDG | RIB | G1P | TAG | beta HEM |
---|---|---|---|---|---|---|---|---|---|---|---|
52836 | - | + | - | - | - | - | - | + | - | - | - |
API rID32STR
@ref | ADH Arg | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | CDEX | VP | APPA | beta GAL | PyrA | beta NAG | GTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Mbeta DG | TAG | beta MAN | URE |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
52836 | + | + | - | - | - | - | + | - | - | - | + | - | + | - | - | + | + | - | - | + | + | + | - | - | - | + | - | - | + | - | + | - |
Isolation, sampling and environmental information
isolation
- @ref: 52836
- sample type: Human blood
- sampling date: 1996-03-01
- geographic location: Sundsvall
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | |
#Host Body Product | #Fluids | #Blood |
External links
@ref: 52836
culture collection no.: CCUG 35583
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
52836 | Curators of the CCUG | https://www.ccug.se/strain?id=35583 | Culture Collection University of Gothenburg (CCUG) (CCUG 35583) | |
68376 | Automatically annotated from API LIST | |||
68379 | Automatically annotated from API Coryne | |||
68381 | Automatically annotated from API rID32STR | |||
68382 | Automatically annotated from API zym |