Strain identifier

BacDive ID: 148393

Type strain: No

Species: Burkholderia vietnamiensis

NCBI tax ID(s): 60552 (species)

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General

@ref: 52681

BacDive-ID: 148393

keywords: Bacteria

description: Burkholderia vietnamiensis CCUG 35344 is a bacterium that was isolated from Human bronchial alveolar lavage,42-yr-old man.

NCBI tax id

  • NCBI tax id: 60552
  • Matching level: species

doi: 10.13145/bacdive148393.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia vietnamiensis
  • full scientific name: Burkholderia vietnamiensis Gillis et al. 1995

@ref: 52681

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia vietnamiensis

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase-1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52681C14:0614
    52681C16:011.916
    52681C18:01.518
    52681C12:0 ALDE ?0.710.915
    52681C13:1 at 12-13112.931
    52681C14:0 3OH/C16:1 ISO I8.515.485
    52681C16:0 2OH2.317.233
    52681C16:0 3OH4.717.52
    52681C16:1 2OH4.217.047
    52681C16:1 ω7c30.815.819
    52681C17:0 CYCLO3.416.888
    52681C18:1 2OH4.519.088
    52681C18:1 ω7c /12t/9t19.817.824
    52681C18:2 ω6,9c/C18:0 ANTE0.417.724
    52681Unidentified0.413.244
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52681-+++++----++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
52681+------++++++-++-+++-

Isolation, sampling and environmental information

isolation

  • @ref: 52681
  • sample type: Human bronchial alveolar lavage,42-yr-old man
  • sampling date: 1996-01-30
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body-Site#Oral cavity and airways#Lung
#Infection#Medical environment#Medical practice
#Infection#Patient

External links

@ref: 52681

culture collection no.: CCUG 35344

straininfo link

  • @ref: 102960
  • straininfo: 28054

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52681Curators of the CCUGhttps://www.ccug.se/strain?id=35344Culture Collection University of Gothenburg (CCUG) (CCUG 35344)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
102960Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID28054.1