Strain identifier

BacDive ID: 147985

Type strain: No

Species: Microbacterium sp.

NCBI tax ID(s): 51671 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 52215

BacDive-ID: 147985

keywords: Bacteria

description: Microbacterium sp. CCUG 34624 is a bacterium that was isolated from Water.

NCBI tax id

  • NCBI tax id: 51671
  • Matching level: species

doi: 10.13145/bacdive147985.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Microbacteriaceae
  • genus: Microbacterium
  • species: Microbacterium sp.
  • full scientific name: Microbacterium Orla-Jensen 1919 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Aureobacterium

@ref: 52215

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Microbacteriaceae

genus: Microbacterium

species: Microbacterium sp.

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose-fermentation
6837965327D-xylose+fermentation
6837916899D-mannitol+fermentation
6837917306maltose+fermentation
6837917716lactose+fermentation
6837917992sucrose+fermentation
6837928087glycogen+fermentation

enzymes

@refvalueactivityec
68379catalase-1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52215C16:02.516
    52215C18:00.618
    52215C14:0 ISO0.713.618
    52215C15:0 ANTEISO35.814.711
    52215C15:0 ISO7.814.621
    52215C16:0 iso22.915.626
    52215C17:0 anteiso21.316.722
    52215C17:0 iso3.616.629
    52215C17:1 ω5c0.616.918
    52215C18:1 ω9c0.417.769
    52215C18:2 ω6,9c/C18:0 ANTE0.517.724
    52215Unidentified0.316.839
    52215Unidentified0.516.985
    52215Unidentified1.317.089
    52215Unidentified0.718.519
    52215Unidentified0.718.71
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
52215-+---++++---+-++++++-

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52215--++-++---+--+-+++--

Isolation, sampling and environmental information

isolation

  • @ref: 52215
  • sample type: Water
  • sampling date: 1995-07-01
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic

External links

@ref: 52215

culture collection no.: CCUG 34624

straininfo link

  • @ref: 102619
  • straininfo: 55265

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52215Curators of the CCUGhttps://www.ccug.se/strain?id=34624Culture Collection University of Gothenburg (CCUG) (CCUG 34624)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
102619Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID55265.1