Strain identifier

BacDive ID: 147870

Type strain: No

Species: Burkholderia contaminans

NCBI tax ID(s): 488447 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 52091

BacDive-ID: 147870

keywords: Bacteria

description: Burkholderia contaminans CCUG 34411 is a bacterium that was isolated from Human respiratory tract,cystic fibrosis.

NCBI tax id

  • NCBI tax id: 488447
  • Matching level: species

doi: 10.13145/bacdive147870.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia contaminans
  • full scientific name: Burkholderia contaminans Vanlaere et al. 2009

@ref: 52091

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia contaminans

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose+fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52091C14:06.214
    52091C15:01.215
    52091C16:021.716
    52091C17:00.317
    52091C18:00.318
    52091C14:0 3OH/C16:1 ISO I5.815.485
    52091C16:0 2OH2.217.233
    52091C16:0 3OH5.217.52
    52091C16:1 2OH1.717.047
    52091C16:1 ω7c1015.819
    52091C17:0 CYCLO20.316.888
    52091C18:1 2OH4.619.088
    52091C18:1 ω7c /12t/9t14.517.824
    52091C18:2 ω6,9c/C18:0 ANTE0.817.724
    52091C19:0 CYCLO ω8c5.318.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52091-+++++----++----++--

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
52091+-+--+++++-++-+++++++

Isolation, sampling and environmental information

isolation

  • @ref: 52091
  • sample type: Human respiratory tract,cystic fibrosis
  • sampling date: 1993
  • geographic location: Huddinge
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Oral cavity and Airways
#Infection#Disease#Cystic fibrosis
#Infection#Patient

External links

@ref: 52091

culture collection no.: CCUG 34411, LMG 16227

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52091Curators of the CCUGhttps://www.ccug.se/strain?id=34411Culture Collection University of Gothenburg (CCUG) (CCUG 34411)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym