Strain identifier

BacDive ID: 147870

Type strain: No

Species: Burkholderia contaminans

NCBI tax ID(s): 488447 (species)

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General

@ref: 52091

BacDive-ID: 147870

keywords: Bacteria

description: Burkholderia contaminans CCUG 34411 is a bacterium that was isolated from Human respiratory tract,cystic fibrosis.

NCBI tax id

  • NCBI tax id: 488447
  • Matching level: species

doi: 10.13145/bacdive147870.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia contaminans
  • full scientific name: Burkholderia contaminans Vanlaere et al. 2009

@ref: 52091

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia contaminans

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose+fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52091C14:06.214
    52091C15:01.215
    52091C16:021.716
    52091C17:00.317
    52091C18:00.318
    52091C14:0 3OH/C16:1 ISO I5.815.485
    52091C16:0 2OH2.217.233
    52091C16:0 3OH5.217.52
    52091C16:1 2OH1.717.047
    52091C16:1 ω7c1015.819
    52091C17:0 CYCLO20.316.888
    52091C18:1 2OH4.619.088
    52091C18:1 ω7c /12t/9t14.517.824
    52091C18:2 ω6,9c/C18:0 ANTE0.817.724
    52091C19:0 CYCLO ω8c5.318.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52091-+++++----++----++--

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
52091+-+--+++++-++-+++++++

Isolation, sampling and environmental information

isolation

  • @ref: 52091
  • sample type: Human respiratory tract,cystic fibrosis
  • sampling date: 1993
  • geographic location: Huddinge
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Oral cavity and Airways
#Infection#Disease#Cystic fibrosis
#Infection#Patient

External links

@ref: 52091

culture collection no.: CCUG 34411, LMG 16227

straininfo link

  • @ref: 102522
  • straininfo: 8386

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52091Curators of the CCUGhttps://www.ccug.se/strain?id=34411Culture Collection University of Gothenburg (CCUG) (CCUG 34411)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
102522Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID8386.1