Strain identifier

BacDive ID: 147733

Type strain: No

Species: Cutibacterium avidum

NCBI tax ID(s): 33010 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 51937

BacDive-ID: 147733

keywords: Bacteria

description: Cutibacterium avidum CCUG 34109 is a bacterium that was isolated from Human joint fluid,hip.

NCBI tax id

  • NCBI tax id: 33010
  • Matching level: species

doi: 10.13145/bacdive147733.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Propionibacteriales
  • family: Propionibacteriaceae
  • genus: Cutibacterium
  • species: Cutibacterium avidum
  • full scientific name: Cutibacterium avidum (Eggerth 1935) Scholz and Kilian 2016
  • synonyms

    @refsynonym
    20215Bacteroides avidus
    20215Propionibacterium avidum

@ref: 51937

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Propionibacteriales

family: Propionibacteriaceae

genus: Cutibacterium

species: Cutibacterium avidum

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose+fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose+fermentation
6837917716lactose-fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase-3.5.1.B15
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase+3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    51937C14:00.514
    51937C15:02.815
    51937C16:0516
    51937C17:00.617
    51937C18:02.618
    51937C14:0 2OH0.615.205
    51937C14:0 ISO 3OH4.415.117
    51937C15:0 ANTEISO7.914.711
    51937C15:0 ISO51.214.621
    51937C16:0 iso1.315.626
    51937C16:1 ISO H115.461
    51937C17:0 anteiso1.516.722
    51937C17:0 iso916.629
    51937C17:0 iso 3OH0.418.161
    51937C17:1 ω5c ISO0.916.461
    51937C18:1 ω9c2.717.769
    51937C18:2 ω6,9c/C18:0 ANTE3.917.724
    51937Unidentified0.416.103
    51937Unidentified117.102
    51937Unidentified0.517.253
    51937Unidentified1.118.219
    51937unknown 13.5660.813.566
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
51937--+--++++-+-++--+-+-+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
51937----------++++-++++-

Isolation, sampling and environmental information

isolation

  • @ref: 51937
  • sample type: Human joint fluid,hip
  • sampling date: 1995-02-01
  • geographic location: Stockholm
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids
#Host Body-Site#Limb#Joint
#Infection#Patient

External links

@ref: 51937

culture collection no.: CCUG 34109

straininfo link

  • @ref: 102410
  • straininfo: 8639

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
51937Curators of the CCUGhttps://www.ccug.se/strain?id=34109Culture Collection University of Gothenburg (CCUG) (CCUG 34109)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
102410Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID8639.1