Strain identifier

BacDive ID: 147538

Type strain: No

Species: Clostridium cadaveris

NCBI tax ID(s): 1529 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 51719

BacDive-ID: 147538

keywords: Bacteria

description: Clostridium cadaveris CCUG 33765 is a bacterium that was isolated from Human wound,leg,necrotic.

NCBI tax id

  • NCBI tax id: 1529
  • Matching level: species

doi: 10.13145/bacdive147538.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Clostridiaceae
  • genus: Clostridium
  • species: Clostridium cadaveris
  • full scientific name: Clostridium cadaveris (Klein 1899) McClung and McCoy 1957 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Bacillus cadaveris

@ref: 51719

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Eubacteriales

family: Clostridiaceae

genus: Clostridium

species: Clostridium cadaveris

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837378019triphenyltetrazolium chloride+reduction
6837317634D-glucose-assimilation
6837330031succinate-assimilation
6837325115malate-assimilation
6838016199urea-hydrolysis
6838029016arginine-hydrolysis
6838016024D-mannose-fermentation
6838016634raffinose-fermentation
6838029985L-glutamate-degradation
6838017632nitrate-reduction
6838027897tryptophan+energy source

antibiotic resistance

  • @ref: 68373
  • ChEBI: 474053
  • metabolite: cefazolin
  • is antibiotic: yes
  • is sensitive: yes
  • sensitivity conc.: 224 µg

metabolite production

@refChebi-IDmetaboliteproduction
6837316136hydrogen sulfideno
6838035581indoleyes

metabolite tests

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68380serine arylamidase-
68380glutamyl-glutamate arylamidase-
68380histidine arylamidase-
68380glycin arylamidase-
68380alanine arylamidase-3.4.11.2
68380tyrosine arylamidase-
68380pyrrolidonyl arylamidase+3.4.19.3
68380leucine arylamidase-3.4.11.1
68380phenylalanine arylamidase-
68380leucyl glycin arylamidase-3.4.11.1
68380proline-arylamidase-3.4.11.5
68380L-arginine arylamidase-
68380alkaline phosphatase-3.1.3.1
68380tryptophan deaminase+4.1.99.1
68380alpha-fucosidase-3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380N-acetyl-beta-glucosaminidase+3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase-3.2.1.21
68380alpha-glucosidase-3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase+3.2.1.23
68380alpha-galactosidase-3.2.1.22
68380arginine dihydrolase-3.5.3.6
68380urease-3.5.1.5
68373catalase-1.11.1.6
68373alkaline phosphatase-3.1.3.1
68373pyrrolidonyl arylamidase+3.4.19.3
68373gamma-glutamyltransferase-2.3.2.2

API CAM

@refGGTTTCPYRAPALH2SGLUSUTCFZMLTCAT
51719-++-------

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
51719---+-----+-----+------+------

Isolation, sampling and environmental information

isolation

  • @ref: 51719
  • sample type: Human wound,leg,necrotic
  • sampling date: 1995-01-01
  • geographic location: Falun
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Other#Wound
#Host Body-Site#Limb#Leg
#Infection#Patient

External links

@ref: 51719

culture collection no.: CCUG 33765

straininfo link

  • @ref: 102236
  • straininfo: 52872

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
51719Curators of the CCUGhttps://www.ccug.se/strain?id=33765Culture Collection University of Gothenburg (CCUG) (CCUG 33765)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68373Automatically annotated from API CAM
68380Automatically annotated from API rID32A
102236Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID52872.1