Strain identifier

BacDive ID: 147316

Type strain: No

Species: Pantoea sp.

NCBI tax ID(s): 69393 (species)

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General

@ref: 51473

BacDive-ID: 147316

keywords: Bacteria

description: Pantoea sp. CCUG 33356 is a bacterium that was isolated from Human sputum.

NCBI tax id

  • NCBI tax id: 69393
  • Matching level: species

doi: 10.13145/bacdive147316.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Erwiniaceae
  • genus: Pantoea
  • species: Pantoea sp.
  • full scientific name: Pantoea Gavini et al. 1989

  • synonyms

    • @ref: 20215
    • synonym: Kalamiella

@ref: 51473

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Erwiniaceae

genus: Pantoea

species: Pantoea sp.

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837716199urea-hydrolysis
6837727897tryptophan-energy source
6837718257ornithine-degradation
6837717992sucrose+builds acid from
6837717306maltose-builds acid from
6837715824D-fructose+builds acid from
6837717634D-glucose+builds acid from
6837417057cellobiose-builds acid from
6837430911sorbitol-builds acid from
6837417268myo-inositol-builds acid from
6837427082trehalose+builds acid from
6837462345L-rhamnose+builds acid from
6837418333D-arabitol+builds acid from
6837430849L-arabinose+builds acid from
6837427897tryptophan-energy source
6837418394palatinose-builds acid from
6837416899D-mannitol+builds acid from
6837418024D-galacturonic acid-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837418403L-arabitol-builds acid from
6837417992sucrose+builds acid from
6837417634D-glucose+builds acid from
6837415792malonate+assimilation
6837415963ribitol-builds acid from
6837417306maltose-builds acid from
6837416199urea-hydrolysis
6837425094lysine-degradation
6837429016arginine-hydrolysis
6837418257ornithine-degradation

metabolite production

@refChebi-IDmetaboliteproduction
6837735581indoleno
6837435581indoleno

metabolite tests

@refChebi-IDmetaboliteindole test
6837435581indole-
6837735581indole-

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)-
68382alkaline phosphatase+3.1.3.1
68377beta-lactamase-3.5.2.6
68374alpha-maltosidase-
68374alpha-galactosidase-3.2.1.22
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase+
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68374L-aspartate arylamidase-3.4.11.21
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase+3.2.1.23
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase-
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase-4.1.1.17

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    51473C12:04.812
    51473C14:0714
    51473C16:034.316
    51473C14:0 3OH/C16:1 ISO I9.415.485
    51473C16:1 ω7c31.115.819
    51473C17:0 CYCLO5.816.888
    51473C18:1 ω7c /12t/9t6.717.824
    51473unknown 13.9610.913.961
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
51473-+-+-+----++-+------

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
51473---------++----+--+++++--++-----

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
51473-++-+--+++-+-

Isolation, sampling and environmental information

isolation

  • @ref: 51473
  • sample type: Human sputum
  • sampling date: 1994-09-16
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Sputum

External links

@ref: 51473

culture collection no.: CCUG 33356

straininfo link

  • @ref: 102042
  • straininfo: 56033

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
51473Curators of the CCUGhttps://www.ccug.se/strain?id=33356Culture Collection University of Gothenburg (CCUG) (CCUG 33356)
68374Automatically annotated from API ID32E
68377Automatically annotated from API NH
68382Automatically annotated from API zym
102042Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID56033.1