Strain identifier

BacDive ID: 14716

Type strain: Yes

Species: Streptococcus alactolyticus

Strain Designation: GP2

Strain history: CIP <- 1988, NCFB <- Cent. Vet. Lab., Weybridge, UK: strain GP2, Streptococcus equinus

NCBI tax ID(s): 29389 (species)

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General

@ref: 9038

BacDive-ID: 14716

DSM-Number: 20728

keywords: 16S sequence, Bacteria, microaerophile, mesophilic, Gram-positive, coccus-shaped

description: Streptococcus alactolyticus GP2 is a microaerophile, mesophilic, Gram-positive bacterium that was isolated from pig intestine.

NCBI tax id

  • NCBI tax id: 29389
  • Matching level: species

strain history

@refhistory
9038<- NCDO <- A.W. Stableforth, GP2 (Streptococcus equinus)
67770LMG 14808 <-- NCFB 1091 <-- A. Stableforth; Cent. Vet. Lab. (CVL), UK; GP2 (Streptococcus equinus) <-- C. Niven; Am. Meat Inst. Found., USA.
116173CIP <- 1988, NCFB <- Cent. Vet. Lab., Weybridge, UK: strain GP2, Streptococcus equinus

doi: 10.13145/bacdive14716.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Streptococcaceae
  • genus: Streptococcus
  • species: Streptococcus alactolyticus
  • full scientific name: Streptococcus alactolyticus Farrow et al. 1985

  • synonyms

    • @ref: 20215
    • synonym: Streptococcus intestinalis

@ref: 9038

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Streptococcaceae

genus: Streptococcus

species: Streptococcus alactolyticus

full scientific name: Streptococcus alactolyticus Farrow et al. 1985

strain designation: GP2

type strain: yes

Morphology

cell morphology

  • @ref: 116173
  • gram stain: positive
  • cell shape: coccus-shaped
  • motility: no

colony morphology

  • @ref: 9038
  • type of hemolysis: gamma
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9038COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
9038TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
40582MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
116173CIP Medium 253yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=253
116173CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6

culture temp

@refgrowthtypetemperaturerange
9038positivegrowth37mesophilic
40582positivegrowth37mesophilic
67770positivegrowth37mesophilic
116173positivegrowth45thermophilic
116173nogrowth5psychrophilic
116173nogrowth10psychrophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
9038microaerophile
116173facultative anaerobe

murein

  • @ref: 9038
  • murein short key: A11.04
  • type: A3alpha L-Lys-L-Ala

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
1161734853esculin+hydrolysis
11617317632nitrate-reduction
11617316301nitrite-reduction
6838129016arginine-hydrolysis
6838116988D-ribose-builds acid from
6838130911sorbitol-builds acid from
6838117716lactose-builds acid from
6838127082trehalose-builds acid from
6838116634raffinose+builds acid from
6838117992sucrose+builds acid from
6838130849L-arabinose-builds acid from
6838118333D-arabitol-builds acid from
6838140585alpha-cyclodextrin-builds acid from
68381606565hippurate-hydrolysis
6838128087glycogen-builds acid from
6838127941pullulan-builds acid from
6838117306maltose+builds acid from
6838128053melibiose+builds acid from
683816731melezitose-builds acid from
68381320055methyl beta-D-glucopyranoside+builds acid from
6838116443D-tagatose-builds acid from
6838116199urea+hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
11617335581indoleno
6838115688acetoinyes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6838115688acetoin+
11617315688acetoin-

enzymes

@refvalueactivityec
9038catalase-1.11.1.6
9038cytochrome-c oxidase-1.9.3.1
68381urease+3.5.1.5
68381beta-mannosidase-3.2.1.25
68381glycyl tryptophan arylamidase-
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381pyrrolidonyl arylamidase-3.4.19.3
68381beta-galactosidase-3.2.1.23
68381Alanyl-Phenylalanyl-Proline arylamidase+
68381alkaline phosphatase-3.1.3.1
68381alpha-galactosidase+3.2.1.22
68381beta-glucuronidase-3.2.1.31
68381beta-glucosidase+3.2.1.21
68381arginine dihydrolase-3.5.3.6
116173oxidase-
116173beta-galactosidase-3.2.1.23
116173alcohol dehydrogenase-1.1.1.1
116173catalase-1.11.1.6
116173lysine decarboxylase-4.1.1.18
116173ornithine decarboxylase-4.1.1.17
116173urease-3.5.1.5

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
9038-+--+--+---++---++-------++-+--+
9038-+--+--+/----++---++-------++-+--+
9038-+--+--+---++---++-------++-+--+

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinent
9038pig intestine
48704Pig intestine
67770Pig, intestine
116173Animal, Pig, intestineUnited KingdomGBREurope

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Suidae (Pig,Swine)
#Host Body-Site#Gastrointestinal tract

taxonmaps

  • @ref: 69479
  • File name: preview.99_11739.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_4;96_100;97_7129;98_8805;99_11739&stattab=map
  • Last taxonomy: Streptococcus alactolyticus subclade
  • 16S sequence: AF201899
  • Sequence Identity:
  • Total samples: 25726
  • soil counts: 611
  • aquatic counts: 1055
  • animal counts: 23746
  • plant counts: 314

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
90381Risk group (German classification)
1161732Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptococcus alactolyticus strain ATCC 43077 16S-23S ribosomal RNA intergenic spacer, partial sequenceAY353082318ena29389
20218S.alactolyticus 16S rRNAX583191334ena29389
9038Streptococcus alactolyticus 16S ribosomal RNA gene, partial sequenceAF2018991437ena29389

GC content

@refGC-content
903840.6
6777039-41

External links

@ref: 9038

culture collection no.: CCUG 27297, LMG 14808, DSM 20728, ATCC 43077, NCDO 1091, JCM 31116, BCRC 14738, CECT 975, CIP 103244, CNCTC 6615, HAMBI 1719, KCTC 3644, NCFB 1091, NCIMB 701091

straininfo link

  • @ref: 83835
  • straininfo: 9386

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9038Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20728)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20728
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
40582Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15020
48704Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 27297)https://www.ccug.se/strain?id=27297
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68381Automatically annotated from API rID32STR
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
83835Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID9386.1StrainInfo: A central database for resolving microbial strain identifiers
116173Curators of the CIPCollection of Institut Pasteur (CIP 103244)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103244