Strain identifier

BacDive ID: 147009

Type strain: No

Species: Vibrio alginolyticus

NCBI tax ID(s): 663 (species)

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General

@ref: 51109

BacDive-ID: 147009

keywords: Bacteria

description: Vibrio alginolyticus CCUG 32638 is a bacterium that was isolated from Human wound,skin,79-yr-old man.

NCBI tax id

  • NCBI tax id: 663
  • Matching level: species

doi: 10.13145/bacdive147009.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio alginolyticus
  • full scientific name: Vibrio alginolyticus (Miyamoto et al. 1961) Sakazaki 1968 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Oceanomonas alginolytica
    20215Beneckea alginolytica

@ref: 51109

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio alginolyticus

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837430911sorbitol-builds acid from
6837417057cellobiose-builds acid from
6837462345L-rhamnose-builds acid from
6837417268myo-inositol-builds acid from
6837427082trehalose+builds acid from
6837430849L-arabinose-builds acid from
6837418333D-arabitol-builds acid from
6837427897tryptophan+energy source
6837418394palatinose-builds acid from
6837416899D-mannitol-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837418403L-arabitol-builds acid from
6837418024D-galacturonic acid-builds acid from
6837416199urea-hydrolysis
6837425094lysine-degradation
6837429016arginine-hydrolysis
6837418257ornithine-degradation
6837417992sucrose-builds acid from
6837417634D-glucose-builds acid from
6837415792malonate-assimilation
6837415963ribitol-builds acid from
6837417306maltose-builds acid from

metabolite production

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase-
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin+3.4.21.4
68382cystine arylamidase-3.4.11.3
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382lipase (C 14)-
68382esterase lipase (C 8)-
68382esterase (C 4)-
68382alkaline phosphatase+3.1.3.1
68374alpha-glucosidase-3.2.1.20
68374L-aspartate arylamidase-3.4.11.21
68374alpha-maltosidase+
68374alpha-galactosidase-3.2.1.22
68374beta-galactosidase-3.2.1.23
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase-
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase-4.1.1.17

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    51109C12:03.712
    51109C14:06.314
    51109C15:0315
    51109C16:01516
    51109C17:0217
    51109C18:00.518
    51109C12:0 3OH2.213.455
    51109C13:0 iso1.512.612
    51109C14:0 3OH/C16:1 ISO I3.515.485
    51109C15:0 ISO1.314.621
    51109C15:0 ISO 3OH0.816.135
    51109C16:0 iso0.715.626
    51109C16:1 ω7c37.715.819
    51109C17:0 iso1.916.629
    51109C17:1 ω6c1.416.862
    51109C17:1 ω8c3.116.792
    51109C18:1 ω7c /12t/9t13.217.824
    51109C18:2 ω6,9c/C18:0 ANTE1.517.724
    51109unknown 12.4860.712.486
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
51109-+---+--+-+---------

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
51109--------++------+--------+----+-

Isolation, sampling and environmental information

isolation

  • @ref: 51109
  • sample type: Human wound,skin,79-yr-old man
  • sampling date: 1994-02-22
  • geographic location: Uppsala
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body-Site#Other#Wound
#Host Body-Site#Organ#Skin, Nail, Hair
#Infection#Patient

External links

@ref: 51109

culture collection no.: CCUG 32638

straininfo link

  • @ref: 101787
  • straininfo: 58185

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
51109Curators of the CCUGhttps://www.ccug.se/strain?id=32638Culture Collection University of Gothenburg (CCUG) (CCUG 32638)
68374Automatically annotated from API ID32E
68382Automatically annotated from API zym
101787Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID58185.1