Strain identifier

BacDive ID: 146918

Type strain: No

Species: Rothia dentocariosa

NCBI tax ID(s): 2047 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 9.2 (current version):
version 8.1:
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 9.2 (current version)

General

@ref: 51016

BacDive-ID: 146918

keywords: Bacteria

description: Rothia dentocariosa CCUG 32449 is a bacterium that was isolated from Human pharynx.

NCBI tax id

  • NCBI tax id: 2047
  • Matching level: species

doi: 10.13145/bacdive146918.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Rothia
  • species: Rothia dentocariosa
  • full scientific name: Rothia dentocariosa corrig. (Onishi 1949) Georg and Brown 1967 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Rothia dentocariosus
    20215Actinomyces dentocariosus
    20215Nocardia dentocariosus

@ref: 51016

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Rothia

species: Rothia dentocariosa

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838116199urea+hydrolysis
6838116443D-tagatose-builds acid from
68381320055methyl beta-D-glucopyranoside+builds acid from
683816731melezitose-builds acid from
6838128053melibiose-builds acid from
6838117306maltose+builds acid from
6838127941pullulan-builds acid from
6838128087glycogen-builds acid from
68381606565hippurate-hydrolysis
6838118333D-arabitol-builds acid from
6838140585alpha-cyclodextrin-builds acid from
6838130849L-arabinose-builds acid from
6838117992sucrose+builds acid from
6838116634raffinose-builds acid from
6838127082trehalose+builds acid from
6838117716lactose-builds acid from
6838130911sorbitol-builds acid from
6838116899D-mannitol-builds acid from
6838116988D-ribose-builds acid from
6838129016arginine+hydrolysis
6837522599arabinose-fermentation
6837559640N-acetylglucosamine-fermentation
6837517992sucrose+fermentation
6837517632nitrate+reduction
6837517057cellobiose-fermentation
6837516988D-ribose-fermentation
6837527082trehalose+fermentation
6837517306maltose+fermentation
6837515824D-fructose+fermentation
6837517634D-glucose+fermentation
683754853esculin-hydrolysis
6837518257ornithine-degradation
6837529016arginine-hydrolysis
6837516199urea-hydrolysis
6837928087glycogen-fermentation
6837917992sucrose+fermentation
6837917716lactose-fermentation
6837917306maltose+fermentation
6837916899D-mannitol-fermentation
6837965327D-xylose-fermentation
6837916988D-ribose-fermentation
6837917634D-glucose+fermentation
683795291gelatin+hydrolysis
6837916199urea-hydrolysis
683794853esculin+hydrolysis
6837917632nitrate+reduction
6837532528turanose-fermentation
6837516634raffinose-fermentation
6837516899D-mannitol-fermentation
6837517716lactose-fermentation
6837516024D-mannose-fermentation

antibiotic resistance

  • @ref: 68375
  • ChEBI: 28368
  • metabolite: novobiocin
  • is antibiotic: yes
  • is sensitive: yes
  • sensitivity conc.: 1.8 µg

metabolite production

@refChebi-IDmetaboliteproduction
6838115688acetoinyes
6837515688acetoinno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6838115688acetoin+
6837515688acetoin-

enzymes

@refvalueactivityec
68381urease+3.5.1.5
68381beta-mannosidase-3.2.1.25
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381pyrrolidonyl arylamidase+3.4.19.3
68381Alanyl-Phenylalanyl-Proline arylamidase+
68381alpha-galactosidase-3.2.1.22
68381alkaline phosphatase-3.1.3.1
68381beta-glucuronidase-3.2.1.31
68381beta-glucosidase-3.2.1.21
68381arginine dihydrolase+3.5.3.6
68375beta-glucuronidase-3.2.1.31
68375beta-glucosidase-3.2.1.21
68375urease-3.5.1.5
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379alkaline phosphatase-3.1.3.1
68381glycyl tryptophan arylamidase-
68381beta-galactosidase-3.2.1.23
68375pyrrolidonyl arylamidase+3.4.19.3
68375alkaline phosphatase-3.1.3.1
68375L-arginine arylamidase+
68375beta-galactosidase-3.2.1.23
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase-3.5.3.6
68379catalase-1.11.1.6
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379beta-glucuronidase-3.2.1.31
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    51016C16:012.616
    51016C14:0 ISO2.213.618
    51016C15:0 ANTEISO33.414.711
    51016C15:0 ISO314.621
    51016C16:0 iso18.915.626
    51016C17:0 anteiso27.216.722
    51016C18:2 ω6,9c/C18:0 ANTE2.717.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
51016++----+-+-+-+---+-+--

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
51016----++-+-+----+--+-+-+----

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
51016+---------+-+---++-+-----+--+--+

Isolation, sampling and environmental information

isolation

  • @ref: 51016
  • sample type: Human pharynx
  • sampling date: 1993-12-13
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Oral cavity and airways#Throat
#Infection#Patient

External links

@ref: 51016

culture collection no.: CCUG 32449

straininfo link

  • @ref: 101707
  • straininfo: 56731

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
51016Curators of the CCUGhttps://www.ccug.se/strain?id=32449Culture Collection University of Gothenburg (CCUG) (CCUG 32449)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68375Automatically annotated from API ID32STA
68379Automatically annotated from API Coryne
68381Automatically annotated from API rID32STR
101707Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID56731.1