Strain identifier

BacDive ID: 14682

Type strain: Yes

Species: Lactovum miscens

Strain Designation: AnNAG3

Strain history: <- H.L. Drake, strain anNAG3

NCBI tax ID(s): 190387 (species)

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General

@ref: 5448

BacDive-ID: 14682

DSM-Number: 14925

keywords: Bacteria, 16S sequence, genome sequence, mesophilic

description: Lactovum miscens AnNAG3 is a mesophilic bacterium that was isolated from acidic forest soil.

NCBI tax id

  • NCBI tax id: 190387
  • Matching level: species

strain history: <- H.L. Drake, strain anNAG3

doi: 10.13145/bacdive14682.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Streptococcaceae
  • genus: Lactovum
  • species: Lactovum miscens
  • full scientific name: Lactovum miscens Matthies et al. 2005

@ref: 5448

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Streptococcaceae

genus: Lactovum

species: Lactovum miscens

full scientific name: Lactovum miscens Matthies et al. 2005

strain designation: AnNAG3

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
5448MRS MEDIUM (DSMZ Medium 11)yeshttps://bacmedia.dsmz.de/medium/11Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
5448MRS pre-reduced (DSMZ Medium 11b)yeshttps://bacmedia.dsmz.de/medium/11bName: MRS MEDIUM (pre-reduced) (DSMZ Medium 11b) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Resazurin 0.001 g/l Distilled water

culture temp

  • @ref: 5448
  • growth: positive
  • type: growth
  • temperature: 25
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 5448
  • sample type: acidic forest soil
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Forest
#Environmental#Terrestrial#Soil
#Condition#Acidic

Safety information

risk assessment

  • @ref: 5448
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 5448
  • description: Lactovum miscens 16S rRNA gene, strain anNAG3
  • accession: AJ439543
  • length: 1482
  • database: ena
  • NCBI tax ID: 190387

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Lactovum miscens DSM 14925GCA_014202895scaffoldncbi190387
66792Lactovum miscens strain DSM 14925190387.3wgspatric190387
66792Lactovum miscens DSM 149252861643106draftimg190387

GC content

  • @ref: 5448
  • GC-content: 37.6

External links

@ref: 5448

culture collection no.: DSM 14925, ATCC BAA 490

straininfo link

@refpassport
20218http://www.straininfo.net/strains/386460
20218http://www.straininfo.net/strains/352253

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5448Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14925)https://www.dsmz.de/collection/catalogue/details/culture/DSM-14925
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)