Strain identifier
BacDive ID: 146692
Type strain:
Species: Microbacterium sp.
Variant: CDC A-4
NCBI tax ID(s): 51671 (species)
version 8.1 (current version)
General
@ref: 50741
BacDive-ID: 146692
keywords: Bacteria
description: Microbacterium sp. CCUG 31957 is a bacterium that was isolated from Human eye,conjunctival secretion.
NCBI tax id
- NCBI tax id: 51671
- Matching level: species
doi: 10.13145/bacdive146692.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Microbacteriaceae
- genus: Microbacterium
- species: Microbacterium sp.
- full scientific name: Microbacterium Orla-Jensen 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Aureobacterium
@ref: 50741
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Micrococcales
family: Microbacteriaceae
genus: Microbacterium
species: Microbacterium sp.
variant: CDC A-4
type strain: no
Physiology and metabolism
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68379 | 17632 | nitrate | - | reduction |
68379 | 4853 | esculin | + | hydrolysis |
68379 | 16199 | urea | - | hydrolysis |
68379 | 5291 | gelatin | - | hydrolysis |
68379 | 17634 | D-glucose | - | fermentation |
68379 | 16988 | D-ribose | - | fermentation |
68379 | 65327 | D-xylose | - | fermentation |
68379 | 16899 | D-mannitol | - | fermentation |
68379 | 17306 | maltose | - | fermentation |
68379 | 17716 | lactose | - | fermentation |
68379 | 17992 | sucrose | - | fermentation |
68379 | 28087 | glycogen | - | fermentation |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68379 | catalase | + | 1.11.1.6 |
68379 | gelatinase | - | |
68379 | urease | - | 3.5.1.5 |
68379 | beta-glucosidase | + | 3.2.1.21 |
68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68379 | alpha-glucosidase | + | 3.2.1.20 |
68379 | beta-galactosidase | + | 3.2.1.23 |
68379 | beta-glucuronidase | - | 3.2.1.31 |
68379 | alkaline phosphatase | + | 3.1.3.1 |
68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68379 | pyrazinamidase | - | 3.5.1.B15 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 50741 C16:0 1.8 16 50741 C18:0 1 18 50741 C14:0 ISO 2.1 13.618 50741 C15:0 ANTEISO 35.8 14.711 50741 C15:0 ISO 3.6 14.621 50741 C15:1 ANTEISO A 1 14.526 50741 C16:0 iso 30.2 15.626 50741 C17:0 anteiso 22.3 16.722 50741 C17:0 iso 1.2 16.629 50741 C18:2 ω6,9c/C18:0 ANTE 1 17.724 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API coryne
@ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
50741 | - | - | - | + | - | + | + | - | + | - | - | - | - | - | - | - | - | - | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 50741
- sample type: Human eye,conjunctival secretion
- sampling date: 1993-08-23
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | |
#Host Body-Site | #Organ | #Eye |
#Infection | #Patient |
External links
@ref: 50741
culture collection no.: CCUG 31957
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
50741 | Curators of the CCUG | https://www.ccug.se/strain?id=31957 | Culture Collection University of Gothenburg (CCUG) (CCUG 31957) | |
68379 | Automatically annotated from API Coryne |