Strain identifier

BacDive ID: 146663

Type strain: No

Species: Citrobacter sedlakii

NCBI tax ID(s): 67826 (species)

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General

@ref: 50711

BacDive-ID: 146663

keywords: Bacteria

description: Citrobacter sedlakii CCUG 31748 is a bacterium that was isolated from Human urine,86-yr-old man.

NCBI tax id

  • NCBI tax id: 67826
  • Matching level: species

doi: 10.13145/bacdive146663.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Citrobacter
  • species: Citrobacter sedlakii
  • full scientific name: Citrobacter sedlakii Brenner et al. 1993

@ref: 50711

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Citrobacter

species: Citrobacter sedlakii

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837430911sorbitol-builds acid from
6837417268myo-inositol-builds acid from
6837462345L-rhamnose+builds acid from
6837427082trehalose+builds acid from
6837430849L-arabinose+builds acid from
6837418333D-arabitol-builds acid from
6837417992sucrose-builds acid from
6837427897tryptophan+energy source
6837417634D-glucose+builds acid from
6837415963ribitol-builds acid from
6837416899D-mannitol+builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837418024D-galacturonic acid+builds acid from
6837425094lysine-degradation
6837418257ornithine+degradation
6837429016arginine-hydrolysis
6837417057cellobiose+builds acid from
6837415792malonate+assimilation
6837418394palatinose-builds acid from
6837417306maltose+builds acid from
6837418403L-arabitol-builds acid from
6837416199urea-hydrolysis

metabolite production

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68374alpha-maltosidase-
68374alpha-galactosidase+3.2.1.22
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374L-aspartate arylamidase-3.4.11.21
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase+3.2.1.23
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase-3.2.1.21
68374lipase-
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase+4.1.1.17

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
50711+----+--+-++---++-++-+--+++-+---

Isolation, sampling and environmental information

isolation

  • @ref: 50711
  • sample type: Human urine,86-yr-old man
  • sampling date: 1993-07-01
  • geographic location: Stockholm
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Urine
#Infection#Patient

External links

@ref: 50711

culture collection no.: CCUG 31748

straininfo link

  • @ref: 101500
  • straininfo: 52832

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
50711Curators of the CCUGhttps://www.ccug.se/strain?id=31748Culture Collection University of Gothenburg (CCUG) (CCUG 31748)
68374Automatically annotated from API ID32E
101500Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID52832.1