Strain identifier

BacDive ID: 146611

Type strain: No

Species: Vibrio sp.

NCBI tax ID(s): 678 (species)

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General

@ref: 50654

BacDive-ID: 146611

keywords: Bacteria, mesophilic

description: Vibrio sp. CCUG 31602 is a mesophilic bacterium that was isolated from Cod,hard roe.

NCBI tax id

  • NCBI tax id: 678
  • Matching level: species

doi: 10.13145/bacdive146611.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio sp.
  • full scientific name: Vibrio Pacini 1854 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Beneckea
    20215Lucibacterium
    20215Allomonas

@ref: 50654

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 50654
  • growth: positive
  • type: growth
  • temperature: 25

Physiology and metabolism

halophily

  • @ref: 50654
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: >3 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837430911sorbitol-builds acid from
6837417057cellobiose-builds acid from
6837417268myo-inositol-builds acid from
6837427082trehalose-builds acid from
6837430849L-arabinose-builds acid from
6837417992sucrose-builds acid from
6837417634D-glucose-builds acid from
6837415792malonate-assimilation
6837416899D-mannitol-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837418024D-galacturonic acid-builds acid from
6837418403L-arabitol-builds acid from
6837416199urea-hydrolysis
6837425094lysine-degradation
6837418257ornithine-degradation
6837429016arginine-hydrolysis
6837462345L-rhamnose-builds acid from
6837418333D-arabitol-builds acid from
6837427897tryptophan-energy source
6837418394palatinose-builds acid from
6837415963ribitol-builds acid from
6837417306maltose-builds acid from
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose+fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

@refChebi-IDmetaboliteproduction
6837435581indoleno
6836935581indoleno

metabolite tests

@refChebi-IDmetaboliteindole test
6837435581indole-
6836935581indole-

enzymes

@refvalueactivityec
68374alpha-maltosidase-
68374alpha-galactosidase-3.2.1.22
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374L-aspartate arylamidase-3.4.11.21
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase-3.2.1.23
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase-3.2.1.21
68374lipase-
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase-4.1.1.17
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    50654C12:02.712
    50654C14:01.214
    50654C15:00.815
    50654C16:020.616
    50654C17:00.917
    50654C18:00.618
    50654C12:0 2OH1.213.178
    50654C12:0 ALDE ?4.610.915
    50654C14:0 3OH/C16:1 ISO I4.815.485
    50654C16:1 ω7c47.615.819
    50654C16:1 ω9c0.615.774
    50654C17:1 ω8c1.316.792
    50654C18:1 ω7c /12t/9t11.617.824
    50654C18:1 ω9c0.717.769
    50654unknown 14.5030.814.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
50654+-+-----------+--+--+

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
50654--------+-----------------------

Isolation, sampling and environmental information

isolation

  • @ref: 50654
  • sample type: Cod,hard roe
  • sampling date: 1993-06-09
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2
#Host#Fishes
#Host Body Product

External links

@ref: 50654

culture collection no.: CCUG 31602

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
50654Curators of the CCUGhttps://www.ccug.se/strain?id=31602Culture Collection University of Gothenburg (CCUG) (CCUG 31602)
68369Automatically annotated from API 20NE
68374Automatically annotated from API ID32E