Strain identifier

BacDive ID: 14653

Type strain: No

Species: Staphylococcus nepalensis

Strain Designation: PM34

Strain history: <- J. Spergser; PM34

NCBI tax ID(s): 214473 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 5728

BacDive-ID: 14653

DSM-Number: 15151

keywords: 16S sequence, Bacteria, mesophilic, animal pathogen

description: Staphylococcus nepalensis PM34 is a mesophilic animal pathogen that was isolated from nasal mucosa of a goat.

NCBI tax id

  • NCBI tax id: 214473
  • Matching level: species

strain history

  • @ref: 5728
  • history: <- J. Spergser; PM34

doi: 10.13145/bacdive14653.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus nepalensis
  • full scientific name: Staphylococcus nepalensis Spergser et al. 2003

@ref: 5728

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus nepalensis

full scientific name: Staphylococcus nepalensis Spergser et al. 2003

strain designation: PM34

type strain: no

Culture and growth conditions

culture medium

  • @ref: 5728
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/92
  • composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

  • @ref: 5728
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 5728
  • sample type: nasal mucosa of a goat
  • geographic location: Pakhribas agricultural center
  • country: Nepal
  • origin.country: NPL
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Caprinae (Sheep/Goat)
#Host Body-Site#Organ#Nose

Safety information

risk assessment

  • @ref: 5728
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Staphylococcus nepalensis strain DSM 15151 16S ribosomal RNA gene, partial sequence
  • accession: AY688081
  • length: 464
  • database: ena
  • NCBI tax ID: 214473

External links

@ref: 5728

culture collection no.: DSM 15151

straininfo link

  • @ref: 83780
  • straininfo: 132548

literature

  • topic: Phylogeny
  • Pubmed-ID: 14657137
  • title: Staphylococcus nepalensis sp. nov., isolated from goats of the Himalayan region.
  • authors: Spergser J, Wieser M, Taubel M, Rossello-Mora RA, Rosengarten R, Busse HJ
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.02646-0
  • year: 2003
  • mesh: Altitude, Animals, DNA Fingerprinting, Geography, Goats/*microbiology, India, Microbial Sensitivity Tests, Molecular Sequence Data, *Phylogeny, Polymerase Chain Reaction, Staphylococcus/*classification/genetics/isolation & purification/physiology
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5728Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 15151)https://www.dsmz.de/collection/catalogue/details/culture/DSM-15151
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
83780Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID132548.1StrainInfo: A central database for resolving microbial strain identifiers