Strain identifier

BacDive ID: 146292

Type strain: No

Species: Winkia neuii

NCBI tax ID(s): 33007 (species)

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General

@ref: 50289

BacDive-ID: 146292

keywords: Bacteria, microaerophile

description: Winkia neuii CCUG 30823 is a microaerophile bacterium that was isolated from Human abscess,anal,47-yr-old man.

NCBI tax id

  • NCBI tax id: 33007
  • Matching level: species

doi: 10.13145/bacdive146292.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Actinomycetales
  • family: Actinomycetaceae
  • genus: Winkia
  • species: Winkia neuii
  • full scientific name: Winkia neuii (Funke et al. 1994) Nouioui et al. 2018

  • synonyms

    • @ref: 20215
    • synonym: Actinomyces neuii

@ref: 50289

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Actinomycetaceae

genus: Winkia

species: Winkia neuii

type strain: no

Physiology and metabolism

oxygen tolerance

  • @ref: 50289
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838116443D-tagatose-builds acid from
6838116199urea-hydrolysis
68381320055methyl beta-D-glucopyranoside-builds acid from
683816731melezitose-builds acid from
6838128053melibiose-builds acid from
6838117306maltose-builds acid from
6838127941pullulan-builds acid from
6838128087glycogen-builds acid from
68381606565hippurate+hydrolysis
6838140585alpha-cyclodextrin-builds acid from
6838130849L-arabinose-builds acid from
6838118333D-arabitol-builds acid from
6838117992sucrose-builds acid from
6838116634raffinose-builds acid from
6838117716lactose-builds acid from
6838130911sorbitol-builds acid from
6838116899D-mannitol+builds acid from
6838116988D-ribose+builds acid from
6838129016arginine-hydrolysis
6838027897tryptophan-energy source
6838017632nitrate+reduction
6838016634raffinose+fermentation
6838029985L-glutamate-degradation
6838029016arginine-hydrolysis
6838016024D-mannose+fermentation
6837928087glycogen-fermentation
6837917992sucrose+fermentation
6837917716lactose-fermentation
6837917306maltose+fermentation
6837916899D-mannitol+fermentation
6837965327D-xylose+fermentation
6837916988D-ribose+fermentation
6837917634D-glucose+fermentation
683795291gelatin-hydrolysis
6837916199urea-hydrolysis
683794853esculin-hydrolysis
6837917632nitrate+reduction
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol+builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837132528turanose+builds acid from
6837128066gentiobiose-builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837128017starch-builds acid from
6837116634raffinose+builds acid from
683716731melezitose+builds acid from
6837115443inulin-builds acid from
6837117716lactose-builds acid from
6837117306maltose+builds acid from
6837117057cellobiose-builds acid from
683714853esculin+builds acid from
6837118305arbutin-builds acid from
6837127613amygdalin-builds acid from
6837159640N-acetylglucosamine-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol+builds acid from
6837117268myo-inositol+builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose-builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837116988D-ribose+builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol-builds acid from
68371Potassium 5-ketogluconate-builds acid from
6837118287L-fucose-builds acid from
6837162318D-lyxose-builds acid from
6837127082trehalose+builds acid from
6837117992sucrose+builds acid from
6837128053melibiose+builds acid from
6837117814salicin-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837115824D-fructose-builds acid from
6837117634D-glucose-builds acid from
6837112936D-galactose-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose+builds acid from
6838127082trehalose-builds acid from
6838016199urea-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6838115688acetoinno
6838035581indoleno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6838115688acetoin-
6838035581indole-

enzymes

@refvalueactivityec
68381urease-3.5.1.5
68381beta-mannosidase-3.2.1.25
68381glycyl tryptophan arylamidase-
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381pyrrolidonyl arylamidase-3.4.19.3
68381Alanyl-Phenylalanyl-Proline arylamidase-
68381beta-glucuronidase-3.2.1.31
68381alpha-galactosidase+3.2.1.22
68381beta-glucosidase-3.2.1.21
68381arginine dihydrolase-3.5.3.6
68380leucyl glycin arylamidase+3.4.11.1
68380proline-arylamidase+3.4.11.5
68380alkaline phosphatase-3.1.3.1
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase-3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380beta-glucosidase+3.2.1.21
68380alpha-glucosidase+3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase+3.2.1.23
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68381beta-galactosidase+3.2.1.23
68381alkaline phosphatase-3.1.3.1
68380serine arylamidase+
68380glutamyl-glutamate arylamidase-
68380histidine arylamidase+
68380glycin arylamidase+
68380alanine arylamidase+3.4.11.2
68380tyrosine arylamidase+
68380pyrrolidonyl arylamidase-3.4.19.3
68380leucine arylamidase+3.4.11.1
68380phenylalanine arylamidase+
68380L-arginine arylamidase+
68380N-acetyl-beta-glucosaminidase-3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase-3.2.1.55
68380alpha-galactosidase+3.2.1.22
68380arginine dihydrolase-3.5.3.6
68380urease-3.5.1.5
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379alpha-glucosidase+3.2.1.20
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • @reffatty acidpercentageECL
    50289C10:01.410
    50289C12:02.812
    50289C14:05.614
    50289C16:035.516
    50289C18:00.918
    50289C15:0 2OH0.716.217
    50289C16:0 3OH117.52
    50289C16:1 ω11c13.915.757
    50289C17:0 2OH6.418.249
    50289C17:0 anteiso1.116.722
    50289C17:0 iso 3OH1.218.161
    50289C17:1 ISO I/C16:0 DMA5.616.481
    50289C18:0 2OH0.719.264
    50289C18:1 ω9c17.817.769
    50289C18:2 ω6,9c/C18:0 ANTE3.217.724
    50289C19:1 ISO I1.318.473
    50289Unidentified0.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG
  • @reffatty acidpercentageECL
    50289C14:04.914
    50289C16:032.916
    50289C18:03.118
    50289C16:1 ω9c10.215.774
    50289C17:0 2OH10.518.249
    50289C17:0 iso 3OH2.918.161
    50289C17:1 ISO I/C16:0 DMA5.916.481
    50289C18:1 ω9c22.517.769
    50289C18:2 ω6,9c/C18:0 ANTE7.217.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG
  • @reffatty acidpercentageECL
    50289C12:03.912
    50289C14:0514
    50289C16:03916
    50289C16:1 ω9c15.215.774
    50289C17:0 iso 3OH6.818.161
    50289C17:1 ISO I/C16:0 DMA6.316.481
    50289C18:1 ω9c19.717.769
    50289C18:2 ω6,9c/C18:0 ANTE417.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
50289++---++-----+++++-+-+

API 50CHac

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
50289-----++----------++------+--+-+++-++----+----+----

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
50289--++-++---++--+--+++++-++++-+

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
50289----+-++----------+---+---------

Isolation, sampling and environmental information

isolation

  • @ref: 50289
  • sample type: Human abscess,anal,47-yr-old man
  • sampling date: 1992-11-20
  • geographic location: Växjö
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body-Site#Gastrointestinal tract#Rectum
#Host Body-Site#Other#Abscess
#Infection#Patient

External links

@ref: 50289

culture collection no.: CCUG 30823

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
50289Curators of the CCUGhttps://www.ccug.se/strain?id=30823Culture Collection University of Gothenburg (CCUG) (CCUG 30823)
68371Automatically annotated from API 50CH acid
68379Automatically annotated from API Coryne
68380Automatically annotated from API rID32A
68381Automatically annotated from API rID32STR