Strain identifier

BacDive ID: 146284

Type strain: No

Species: Neisseria weaveri

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 50279

BacDive-ID: 146284

keywords: genome sequence, Bacteria, Gram-negative

description: Neisseria weaveri CCUG 30799 is a Gram-negative bacterium that was isolated from Human wound,dog-bite.

NCBI tax id

NCBI tax idMatching level
28091species
1051972strain

doi: 10.13145/bacdive146284.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Neisseriales
  • family: Neisseriaceae
  • genus: Neisseria
  • species: Neisseria weaveri
  • full scientific name: Neisseria weaveri Holmes et al. 1993
  • synonyms

    • @ref: 20215
    • synonym: Neisseria weaveri

@ref: 50279

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Neisseriales

family: Neisseriaceae

genus: Neisseria

species: Neisseria weaveri

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 99.992

Physiology and metabolism

spore formation

@refspore formationconfidence
69480no99.998
69481no100

Isolation, sampling and environmental information

isolation

  • @ref: 50279
  • sample type: Human wound,dog-bite
  • sampling date: 1962
  • geographic location: New York,Bellevue Hosp.
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host#Mammals#Canidae (Dog)
#Host Body-Site#Other#Wound
#Infection#Patient

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Neisseria weaveri ATCC 51223GCA_000224275contigncbi1051972
66792Neisseria weaveri ATCC 512231051972.3wgspatric1051972
66792Neisseria weaveri ATCC 512232563366766draftimg1051972

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno86.005no
flagellatedno93.452no
gram-positiveno98.968no
anaerobicno97.01no
aerobicno89.035no
halophileno68.058no
spore-formingno96.888no
thermophileno99.076no
glucose-utilyes51.661no
glucose-fermentno92.045no

External links

@ref: 50279

culture collection no.: CCUG 30799, ATCC 51223, CCM 4588

straininfo link

  • @ref: 101184
  • straininfo: 105417

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
50279Curators of the CCUGhttps://www.ccug.se/strain?id=30799Culture Collection University of Gothenburg (CCUG) (CCUG 30799)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
101184Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID105417.1