Strain identifier
BacDive ID: 14625
Type strain:
Species: Staphylococcus saprophyticus
Strain Designation: S-41
Strain history: CIP <- 1976, J. Pillet, Inst. Pasteur, Paris, France <- Schleifer, Germany
NCBI tax ID(s): 342451 (strain), 29385 (species)
General
@ref: 8645
BacDive-ID: 14625
DSM-Number: 20229
keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-positive
description: Staphylococcus saprophyticus S-41 is a facultative anaerobe, mesophilic, Gram-positive bacterium that was isolated from urine.
NCBI tax id
NCBI tax id | Matching level |
---|---|
342451 | strain |
29385 | species |
strain history
@ref | history |
---|---|
8645 | <- CCM; CCM 883 <- NCTC; NCTC 7292 <- S. T. Cowan; S-41 |
67770 | Y. Kosako <-- R. Sakazaki <-- ATCC 15305 <-- NCTC 7292 <-- S. Cowan S-41. |
122488 | CIP <- 1976, J. Pillet, Inst. Pasteur, Paris, France <- Schleifer, Germany |
doi: 10.13145/bacdive14625.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Staphylococcaceae
- genus: Staphylococcus
- species: Staphylococcus saprophyticus
- full scientific name: Staphylococcus saprophyticus (Fairbrother 1940) Shaw et al. 1951 (Approved Lists 1980)
synonyms
@ref synonym 20215 Staphylococcus saprophyticus subsp. bovis 20215 Staphylococcus saprophyticus
@ref: 8645
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Staphylococcaceae
genus: Staphylococcus
species: Staphylococcus saprophyticus subsp. saprophyticus
full scientific name: Staphylococcus saprophyticus subsp. saprophyticus (Fairbrother 1940) Hájek et al. 1996
strain designation: S-41
type strain: yes
Morphology
cell morphology
@ref | gram stain | confidence | cell shape | motility |
---|---|---|---|---|
69480 | positive | 100 | ||
122488 | positive | coccus-shaped | no |
colony morphology
@ref | type of hemolysis | incubation period | hemolysis ability |
---|---|---|---|
8645 | gamma | 1-2 days | |
122488 | 1 |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
8645 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
8645 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://mediadive.dsmz.de/medium/92 | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
41862 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
122488 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
8645 | positive | growth | 37 | mesophilic |
41862 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 37 | mesophilic |
122488 | positive | growth | 22-41 | |
122488 | no | growth | 10 | psychrophilic |
122488 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 122488
- oxygen tolerance: facultative anaerobe
spore formation
- @ref: 69480
- spore formation: no
- confidence: 99.759
murein
- @ref: 8645
- murein short key: A11.03
- type: A3alpha L-Lys-Gly2-4-L-Ser1-2-Gly
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
122488 | 606565 | hippurate | + | hydrolysis |
122488 | 17632 | nitrate | - | reduction |
122488 | 16301 | nitrite | - | reduction |
122488 | 35020 | tributyrin | - | hydrolysis |
68379 | 17632 | nitrate | - | reduction |
68379 | 4853 | esculin | - | hydrolysis |
68379 | 16199 | urea | + | hydrolysis |
68379 | 5291 | gelatin | - | hydrolysis |
68379 | 16988 | D-ribose | - | fermentation |
68379 | 65327 | D-xylose | - | fermentation |
68379 | 16899 | D-mannitol | + | fermentation |
68379 | 17306 | maltose | + | fermentation |
68379 | 17716 | lactose | + | fermentation |
68379 | 17992 | sucrose | + | fermentation |
68379 | 28087 | glycogen | - | fermentation |
68375 | 16199 | urea | + | hydrolysis |
68375 | 29016 | arginine | - | hydrolysis |
68375 | 18257 | ornithine | - | degradation |
68375 | 4853 | esculin | - | hydrolysis |
68375 | 17634 | D-glucose | + | fermentation |
68375 | 15824 | D-fructose | + | fermentation |
68375 | 16024 | D-mannose | - | fermentation |
68375 | 17306 | maltose | + | fermentation |
68375 | 17716 | lactose | + | fermentation |
68375 | 27082 | trehalose | + | fermentation |
68375 | 16899 | D-mannitol | + | fermentation |
68375 | 16634 | raffinose | - | fermentation |
68375 | 16988 | D-ribose | - | fermentation |
68375 | 17057 | cellobiose | - | fermentation |
68375 | 17992 | sucrose | + | fermentation |
68375 | 22599 | arabinose | - | fermentation |
antibiotic resistance
- @ref: 68375
- ChEBI: 28368
- metabolite: novobiocin
- is antibiotic: yes
- is resistant: yes
- resistance conc.: 1.8 µg
metabolite production
- @ref: 122488
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 122488
- Chebi-ID: 15688
- metabolite: acetoin
- voges-proskauer-test: +
enzymes
@ref | value | activity | ec |
---|---|---|---|
8645 | catalase | + | 1.11.1.6 |
8645 | cytochrome-c oxidase | - | 1.9.3.1 |
68375 | beta-glucuronidase | - | 3.2.1.31 |
68375 | L-arginine arylamidase | - | |
68375 | beta-galactosidase | + | 3.2.1.23 |
68375 | beta-glucosidase | - | 3.2.1.21 |
68375 | ornithine decarboxylase | - | 4.1.1.17 |
68375 | arginine dihydrolase | - | 3.5.3.6 |
68375 | urease | + | 3.5.1.5 |
68379 | catalase | + | 1.11.1.6 |
68379 | gelatinase | - | |
68379 | urease | + | 3.5.1.5 |
68379 | beta-glucosidase | - | 3.2.1.21 |
68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68379 | alpha-glucosidase | - | 3.2.1.20 |
68379 | beta-galactosidase | + | 3.2.1.23 |
68379 | beta-glucuronidase | - | 3.2.1.31 |
68379 | alkaline phosphatase | + | 3.1.3.1 |
68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 |
68379 | pyrazinamidase | + | 3.5.1.B15 |
122488 | oxidase | - | |
122488 | beta-galactosidase | + | 3.2.1.23 |
122488 | alcohol dehydrogenase | - | 1.1.1.1 |
122488 | gelatinase | - | |
122488 | amylase | - | |
122488 | DNase | - | |
122488 | caseinase | - | 3.4.21.50 |
122488 | catalase | + | 1.11.1.6 |
122488 | coagulase | - | |
122488 | tween esterase | - | |
122488 | gamma-glutamyltransferase | - | 2.3.2.2 |
122488 | lecithinase | - | |
122488 | lipase | - | |
122488 | lysine decarboxylase | - | 4.1.1.18 |
122488 | ornithine decarboxylase | - | 4.1.1.17 |
122488 | phenylalanine ammonia-lyase | - | 4.3.1.24 |
122488 | protease | - | |
122488 | urease | + | 3.5.1.5 |
68382 | alkaline phosphatase | - | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | - | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | - | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | + | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API coryne
@ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
44677 | - | + | + | + | - | + | - | - | - | + | - | - | - | - | + | + | + | + | - | + |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
122488 | - | - | + | + | - | - | - | - | - | - | + | - | - | + | - | + | - | - | - | - |
API ID32STA
@ref | URE | ADH Arg | ODC | ESC | GLU | FRU | MNE | MAL | LAC | TRE | MAN | RAF | RIB | CEL | NIT | VP | beta GAL | ArgA | PAL | PyrA | NOVO | SAC | NAG | TUR | ARA | beta GUR |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8645 | + | - | - | - | + | + | - | + | + | + | + | - | - | - | - | + | + | - | + | + | + | + | - | +/- | - | - |
8645 | + | - | - | - | + | + | - | + | + | + | + | - | - | - | - | - | + | - | - | - | + | + | - | +/- | - | - |
8645 | + | - | - | - | + | + | - | + | + | + | + | - | - | - | + | + | + | - | - | - | + | + | + | + | - | - |
8645 | + | - | - | - | + | + | - | + | + | + | + | - | - | - | - | + | + | - | - | - | + | + | - | + | - | - |
8645 | + | - | - | - | + | + | - | + | + | + | + | - | - | - | - | + | + | - | + | - | + | + | - | +/- | - | - |
8645 | + | - | - | - | + | + | - | + | + | + | + | - | - | - | - | + | + | - | - | - | + | + | - | + | - | - |
8645 | + | - | - | - | + | + | - | + | + | + | + | - | - | - | - | - | + | - | + | - | + | + | - | +/- | - | - |
8645 | + | - | - | - | + | + | - | + | + | + | + | - | - | - | - | + | + | - | - | - | + | + | - | +/- | - | - |
8645 | + | - | - | - | + | + | - | + | + | + | + | - | - | - | - | + | + | - | + | + | + | + | - | +/- | - | - |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
122488 | + | + | + | + | - | - | - | + | - | + | + | + | + | + | - | - | - | - | - | + | - | - | - | - | - | + | + | - | + | - | - | + | - | + | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | + | - | - | - | - | - | - | - | + | - | - | + | + | + | - | - | + | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | sampling date | isolation date |
---|---|---|---|
8645 | urine | ||
44677 | Human urine | 1935 | |
67770 | Urine | ||
122488 | Urine | 1935 |
isolation source categories
- Cat1: #Host Body Product
- Cat2: #Fluids
- Cat3: #Urine
taxonmaps
- @ref: 69479
- File name: preview.99_63.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_3;97_3;98_3;99_63&stattab=map
- Last taxonomy: Staphylococcus
- 16S sequence: AM237352
- Sequence Identity:
- Total samples: 26921
- soil counts: 930
- aquatic counts: 1554
- animal counts: 23674
- plant counts: 763
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
8645 | 2 | Risk group (German classification) |
122488 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Staphylococcus saprophyticus subsp. saprophyticus partial 16S rRNA gene, isolate OS-34.a | AM237352 | 1503 | ena | 147452 |
20218 | Staphylococcus saprophyticus subsp. saprophyticus strain DSM 20229 16S ribosomal RNA gene, partial sequence | AY688090 | 464 | ena | 342451 |
20218 | Staphylococcus saprophyticus gene for 16S rRNA, partial sequence, strain: ATCC 15305 (= MAFF 911473) | D83371 | 1477 | ena | 29385 |
20218 | Staphylococcus saprophyticus 16S ribosomal RNA (16S rRNA) gene | L37596 | 1498 | ena | 29385 |
20218 | S.saprophyticus gene for 16S ribosomal RNA | Z26902 | 771 | ena | 342451 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 | GCA_000010125 | complete | ncbi | 342451 |
66792 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 | GCA_006094355 | complete | ncbi | 342451 |
66792 | Staphylococcus saprophyticus strain NCTC7292 | 29385.233 | wgs | patric | 29385 |
66792 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 342451.11 | complete | patric | 342451 |
66792 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 342451.33 | plasmid | patric | 342451 |
66792 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 342451.32 | plasmid | patric | 342451 |
66792 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 | 342451.37 | complete | patric | 342451 |
66792 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 strain ATCC 15305 | 342451.30 | wgs | patric | 342451 |
66792 | Staphylococcus saprophyticus subsp. saprophyticus strain NCTC 7292 | 147452.8 | wgs | patric | 29385 |
66792 | Staphylococcus saprophyticus saprophyticus ATCC 15305 | 637000284 | complete | img | 342451 |
67770 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 | GCA_001997165 | contig | ncbi | 342451 |
67770 | Staphylococcus saprophyticus NCTC 7292 | GCA_002902025 | scaffold | ncbi | 29385 |
67770 | Staphylococcus saprophyticus NCTC7292 | GCA_900458885 | contig | ncbi | 29385 |
GC content
@ref | GC-content | method |
---|---|---|
8645 | 31.6 | |
67770 | 33.5 | thermal denaturation, midpoint method (Tm) |
67770 | 33.2 | genome sequence analysis |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 63 | no |
motile | no | 90.607 | no |
flagellated | no | 90.598 | no |
gram-positive | yes | 86.622 | no |
anaerobic | no | 99.238 | no |
halophile | yes | 97.016 | no |
spore-forming | no | 90.334 | no |
thermophile | no | 99.845 | yes |
glucose-util | yes | 89.172 | no |
aerobic | yes | 92.416 | no |
glucose-ferment | yes | 84.937 | yes |
External links
@ref: 8645
culture collection no.: DSM 20229, ATCC 15305, CCM 883, NCIB 8711, NCTC 7292, WDCM 00159, CCUG 3706, ATCC 19701, JCM 2427, BCRC 10786, CCUG 3006, CECT 235, CIP 76.125, IAM 12452, LMG 13350, MTCC 6155, NBIMCC 3348, NBRC 102446, NCAIM B.01067, NCCB 73011, NCFB 948, NCIMB 8711, NRRL B-14751, NCDO 948
straininfo link
- @ref: 83753
- straininfo: 66574
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Enzymology | 1398924 | Staphylococcus saprophyticus hemagglutinin is a 160-kilodalton surface polypeptide. | Gatermann S, Meyer HG, Wanner G | Infect Immun | 10.1128/iai.60.10.4127-4132.1992 | 1992 | Animals, Edetic Acid/pharmacology, Female, Hemagglutination, Hemagglutinins/*analysis/isolation & purification/physiology, Membrane Proteins/*analysis/isolation & purification/physiology, Rabbits, Sheep, Staphylococcus/*chemistry | Phylogeny |
Enzymology | 1541520 | Identification and characterization of a surface-associated protein (Ssp) of Staphylococcus saprophyticus. | Gatermann S, Kreft B, Marre R, Wanner G | Infect Immun | 10.1128/iai.60.3.1055-1060.1992 | 1992 | Animals, Bacterial Proteins/*isolation & purification, Electrophoresis, Polyacrylamide Gel, Female, Gold, Membrane Proteins/*isolation & purification, Microscopy, Electron, Rabbits, Staphylococcus/*chemistry/ultrastructure | Phylogeny |
Pathogenicity | 1741917 | Adhesion of Staphylococcus saprophyticus to renal tubular epithelial cells is mediated by an N-acetyl-galactosamine-specific structure. | Gatermann S, Kretschmar M, Kreft B, Straube E, Schmidt H, Marre R | Zentralbl Bakteriol | 10.1016/s0934-8840(11)80300-2 | 1991 | Acetylgalactosamine/*pharmacology, Animals, Bacterial Adhesion/*drug effects, Cell Line, Enzyme-Linked Immunosorbent Assay, Epithelial Cells, Epithelium/microbiology, Kidney Tubules/cytology/*microbiology, Staphylococcus/drug effects/*metabolism | Metabolism |
Enzymology | 2777370 | Cloning and expression of Staphylococcus saprophyticus urease gene sequences in Staphylococcus carnosus and contribution of the enzyme to virulence. | Gatermann S, Marre R | Infect Immun | 10.1128/iai.57.10.2998-3002.1989 | 1989 | Animals, Bacterial Proteins/*genetics, Cloning, Molecular, Cystitis/enzymology/microbiology, *Genes, Bacterial, Plasmids, Protein Biosynthesis, Rats, Restriction Mapping, Staphylococcal Infections/enzymology/microbiology, Staphylococcus/*enzymology/genetics/pathogenicity, Urease/*genetics/physiology, Urinary Bladder/microbiology, Virulence | |
Stress | 7917223 | Surface properties of Staphylococcus saprophyticus: hydrophobicity, haemagglutination and Staphylococcus saprophyticus surface-associated protein (Ssp) represent distinct entities. | Meyer HG, Gatermann S | APMIS | 1994 | Agglutination, Bacterial Proteins/*analysis, Cell Membrane/physiology, Endopeptidases/metabolism, Hemagglutination, Hemagglutinins/*analysis, Hot Temperature, Membrane Proteins/*analysis, Staphylococcus/chemistry/*physiology, Surface Properties | Metabolism | |
Phylogeny | 14657137 | Staphylococcus nepalensis sp. nov., isolated from goats of the Himalayan region. | Spergser J, Wieser M, Taubel M, Rossello-Mora RA, Rosengarten R, Busse HJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.02646-0 | 2003 | Altitude, Animals, DNA Fingerprinting, Geography, Goats/*microbiology, India, Microbial Sensitivity Tests, Molecular Sequence Data, *Phylogeny, Polymerase Chain Reaction, Staphylococcus/*classification/genetics/isolation & purification/physiology | Genetics |
Genetics | 16135568 | Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection. | Kuroda M, Yamashita A, Hirakawa H, Kumano M, Morikawa K, Higashide M, Maruyama A, Inose Y, Matoba K, Toh H, Kuhara S, Hattori M, Ohta T | Proc Natl Acad Sci U S A | 10.1073/pnas.0502950102 | 2005 | Animals, Bacterial Adhesion, Base Sequence, Carrier Proteins, Cell Line, Tumor, *Genome, Bacterial, Hemagglutination, Humans, Molecular Sequence Data, Open Reading Frames, Plasmids, *Sequence Analysis, DNA, Sheep, Staphylococcus/*genetics/pathogenicity, Urease/metabolism, Urinary Tract Infections/*etiology/*microbiology/pathology, Virulence Factors | Pathogenicity |
Enzymology | 16177313 | The surface-associated protein of Staphylococcus saprophyticus is a lipase. | Sakinc T, Woznowski M, Ebsen M, Gatermann SG | Infect Immun | 10.1128/IAI.73.10.6419-6428.2005 | 2005 | Amino Acid Sequence, Bacterial Proteins/*genetics/*metabolism, Base Sequence, Cell Membrane/*enzymology, Cloning, Molecular, Collagen Type I/metabolism, Lipase/classification/*genetics/*metabolism, Molecular Sequence Data, Mutation, Staphylococcus/*enzymology/genetics/ultrastructure | Metabolism |
Enzymology | 18362191 | Methicillin-resistant Staphylococcus saprophyticus isolates carrying staphylococcal cassette chromosome mec have emerged in urogenital tract infections. | Higashide M, Kuroda M, Omura CT, Kumano M, Ohkawa S, Ichimura S, Ohta T | Antimicrob Agents Chemother | 10.1128/AAC.01150-07 | 2008 | Bacterial Proteins/*genetics, Chromosomes, Bacterial/*genetics, Electrophoresis, Gel, Pulsed-Field, *Methicillin Resistance/genetics, Molecular Sequence Data, Polymerase Chain Reaction, Sequence Analysis, DNA, Staphylococcal Infections/microbiology, Staphylococcus/*classification/drug effects/genetics, Urinary Tract Infections/*microbiology | Genetics |
Pathogenicity | 18573154 | Staphylococcus saprophyticus ATCC 15305 is internalized into human urinary bladder carcinoma cell line 5637. | Szabados F, Kleine B, Anders A, Kaase M, Sakinc T, Schmitz I, Gatermann S | FEMS Microbiol Lett | 10.1111/j.1574-6968.2008.01218.x | 2008 | Anti-Bacterial Agents/pharmacology, Cell Line, Tumor, Colony Count, Microbial, Cytoplasm/microbiology, Epithelial Cells/*microbiology, Flow Cytometry, Humans, Microbial Viability, Microscopy, Electron, Transmission, Staphylococcus/*pathogenicity, Urinary Bladder/*microbiology | |
Metabolism | 20639341 | Characterization of the structure and biological functions of a capsular polysaccharide produced by Staphylococcus saprophyticus. | Park S, Kelley KA, Vinogradov E, Solinga R, Weidenmaier C, Misawa Y, Lee JC | J Bacteriol | 10.1128/JB.00104-10 | 2010 | Bacterial Capsules/*metabolism, Carbohydrate Sequence, Magnetic Resonance Spectroscopy, Microscopy, Atomic Force, Molecular Sequence Data, Multigene Family/genetics, Polysaccharides, Bacterial/*chemistry/*metabolism, Staphylococcus/*metabolism | Genetics |
Genetics | 21103346 | Characterization of a new SCCmec element in Staphylococcus cohnii. | Zong Z, Lu X | PLoS One | 10.1371/journal.pone.0014016 | 2010 | Bacterial Proteins/genetics, Bacterial Typing Techniques, Chromosome Mapping, Chromosomes, Bacterial/*genetics, DNA Nucleotidyltransferases/genetics, DNA, Bacterial/chemistry/*genetics, Methicillin Resistance/*genetics, Models, Genetic, Molecular Sequence Data, Mutation, Polymerase Chain Reaction, Recombinases/genetics, Recombination, Genetic, Sequence Analysis, DNA, Staphylococcus/classification/*genetics, beta-Lactamases/genetics | Transcriptome |
Metabolism | 21253822 | L-Proline nutrition and catabolism in Staphylococcus saprophyticus. | Deutch CE | Antonie Van Leeuwenhoek | 10.1007/s10482-011-9552-7 | 2011 | Arginine/metabolism, Cell Membrane/*metabolism, Culture Media/chemistry, Ornithine/metabolism, Ornithine-Oxo-Acid Transaminase, Proline/metabolism, Proline Oxidase, Pyrroles/metabolism, Pyrroline Carboxylate Reductases, Staphylococcus saprophyticus/*metabolism | Cultivation |
Enzymology | 22546205 | An unusually cold active nitroreductase for prodrug activations. | Celik A, Yetis G | Bioorg Med Chem | 10.1016/j.bmc.2012.04.004 | 2012 | Aniline Mustard/analogs & derivatives/metabolism, Aziridines/metabolism, Cloning, Molecular, Electrophoresis, Polyacrylamide Gel, Enzyme Stability, Escherichia coli/genetics, Flavin Mononucleotide/metabolism, Hydrogen-Ion Concentration, Mass Spectrometry, Nitrofurazone/metabolism, Nitroreductases/genetics/*metabolism, Phylogeny, Prodrugs/*metabolism, Recombinant Proteins/genetics/metabolism, Staphylococcus saprophyticus/*enzymology/genetics, Temperature | Metabolism |
Pathogenicity | 23731467 | A screening for antimicrobial activities of Caribbean herbal remedies. | Luciano-Montalvo C, Boulogne I, Gavillan-Suarez J | BMC Complement Altern Med | 10.1186/1472-6882-13-126 | 2013 | Anti-Infective Agents/*pharmacology, Bacteria/drug effects, Bacterial Infections/drug therapy/microbiology, Caribbean Region, Drug Evaluation, Preclinical, Humans, Microbial Sensitivity Tests, Plant Extracts/*pharmacology, Plants, Medicinal/*chemistry | |
Enzymology | 24001038 | Inhibition of urease activity in the urinary tract pathogen Staphylococcus saprophyticus. | Loes AN, Ruyle L, Arvizu M, Gresko KE, Wilson AL, Deutch CE | Lett Appl Microbiol | 10.1111/lam.12153 | 2013 | Amides/pharmacology, Catechin/analogs & derivatives/pharmacology, Culture Media, Enzyme Inhibitors/*pharmacology, Flavonoids/pharmacology, Hydrogen-Ion Concentration, Hydroxamic Acids/pharmacology, Imidazoles/pharmacology, Kinetics, Staphylococcus saprophyticus/drug effects/*enzymology/pathogenicity, Urease/*antagonists & inhibitors/metabolism, Urinary Tract/drug effects, Urine/microbiology, Virulence Factors/antagonists & inhibitors | Cultivation |
Phylogeny | 28780720 | Evaluation of Lactic Acid Bacteria Isolated from Fermented Plant Products for Antagonistic Activity Against Urinary Tract Pathogen Staphylococcus saprophyticus. | Tsai CC, Lai TM, Lin PP, Hsieh YM | Probiotics Antimicrob Proteins | 10.1007/s12602-017-9302-x | 2018 | *Antibiosis, Bacterial Adhesion, Cell Line, Fermented Foods/*microbiology, Humans, Lactobacillales/classification/genetics/*isolation & purification/*physiology, Phylogeny, Staphylococcal Infections/*microbiology, Staphylococcus saprophyticus/growth & development/*physiology, Urinary Tract Infections/*microbiology, Urothelium/microbiology, Vegetables/*microbiology | Pathogenicity |
30456272 | A proteomic dataset of secreted proteins by three Staphylococcus saprophyticus strains. | Oliveira AS, Rosa IIR, Novaes E, de Oliveira LS, Baeza LC, Borges CL, Marlinghaus L, de Almeida Soares CM, Giambiagi-deMarval M, Parente-Rocha JA | Data Brief | 10.1016/j.dib.2018.10.122 | 2018 | |||
Pathogenicity | 32455889 | In Silico Subtractive Proteomics Approach for Identification of Potential Drug Targets in Staphylococcus saprophyticus. | Shahid F, Ashfaq UA, Saeed S, Munir S, Almatroudi A, Khurshid M | Int J Environ Res Public Health | 10.3390/ijerph17103644 | 2020 | Aged, Computational Biology, Female, Humans, Metabolic Networks and Pathways, Pregnancy, *Proteomics, *Staphylococcal Infections/drug therapy, *Staphylococcus saprophyticus/drug effects/genetics, *Urinary Tract Infections |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
8645 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20229) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-20229 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
41862 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/10905 | ||||
44677 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 3706) | https://www.ccug.se/strain?id=3706 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68375 | Automatically annotated from API ID32STA | |||||
68379 | Automatically annotated from API Coryne | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
83753 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID66574.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
122488 | Curators of the CIP | Collection of Institut Pasteur (CIP 76.125) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2076.125 |