Strain identifier

BacDive ID: 14569

Type strain: No

Species: Staphylococcus schleiferi subsp. schleiferi

Strain Designation: N860215

Strain history: <- J. Fleurette; <- Centre National des Staphylocoques, Lyon, France; N860215

NCBI tax ID(s): 74707 (subspecies)

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General

@ref: 1831

BacDive-ID: 14569

DSM-Number: 4808

keywords: 16S sequence, Bacteria, mesophilic, human pathogen

description: Staphylococcus schleiferi subsp. schleiferi N860215 is a mesophilic human pathogen that was isolated from urine.

NCBI tax id

  • NCBI tax id: 74707
  • Matching level: subspecies

strain history

  • @ref: 1831
  • history: <- J. Fleurette; <- Centre National des Staphylocoques, Lyon, France; N860215

doi: 10.13145/bacdive14569.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus schleiferi subsp. schleiferi
  • full scientific name: Staphylococcus schleiferi subsp. schleiferi (Freney et al. 1988) Igimi et al. 1990

@ref: 1831

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus schleiferi subsp. schleiferi

full scientific name: Staphylococcus schleiferi subsp. schleiferi (Freney et al. 1988) Igimi et al. 1990

strain designation: N860215

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
1831TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
1831COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf

culture temp

  • @ref: 1831
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

murein

  • @ref: 1831
  • murein short key: A11.02
  • type: A3alpha L-Lys-Gly5-6

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837516199urea-hydrolysis
6837529016arginine+hydrolysis
6837518257ornithine-degradation
683754853esculin-hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose+fermentation
6837517306maltose-fermentation
6837517716lactose-fermentation
6837527082trehalose+fermentation
6837516899D-mannitol-fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose-fermentation
6837559640N-acetylglucosamine-fermentation
6837532528turanose-fermentation
6837522599arabinose-fermentation

antibiotic resistance

  • @ref: 68375
  • ChEBI: 28368
  • metabolite: novobiocin
  • is antibiotic: yes
  • is sensitive: yes
  • sensitivity conc.: 1.8 µg

metabolite production

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: yes

metabolite tests

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase+3.4.19.3
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase+3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase+3.5.3.6
68375urease-3.5.1.5

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
1831-+--+++--+----+++-++------

Isolation, sampling and environmental information

isolation

  • @ref: 1831
  • sample type: urine

isolation source categories

  • Cat1: #Host Body Product
  • Cat2: #Fluids
  • Cat3: #Urine

Safety information

risk assessment

  • @ref: 1831
  • pathogenicity human: yes
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Staphylococcus schleiferi subsp. schleiferi strain DSM 4808 16S ribosomal RNA gene, partial sequence
  • accession: AY688093
  • length: 464
  • database: ena
  • NCBI tax ID: 74707

GC content

  • @ref: 1831
  • GC-content: 37.0

External links

@ref: 1831

culture collection no.: DSM 4808

straininfo link

  • @ref: 83699
  • straininfo: 47870

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
1831Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 4808)https://www.dsmz.de/collection/catalogue/details/culture/DSM-4808
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
68375Automatically annotated from API ID32STA
83699Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID47870.1StrainInfo: A central database for resolving microbial strain identifiers