Strain identifier

BacDive ID: 145638

Type strain: No

Species: Pseudoglutamicibacter cumminsii

NCBI tax ID(s): 156979 (species)

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General

@ref: 49504

BacDive-ID: 145638

keywords: Bacteria, microaerophile, mesophilic

description: Pseudoglutamicibacter cumminsii CCUG 29118 is a microaerophile, mesophilic bacterium that was isolated from Human ear,otitis externa,82-yr-old woman.

NCBI tax id

  • NCBI tax id: 156979
  • Matching level: species

doi: 10.13145/bacdive145638.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Pseudoglutamicibacter
  • species: Pseudoglutamicibacter cumminsii
  • full scientific name: Pseudoglutamicibacter cumminsii (Funke et al. 1997) Busse 2016

  • synonyms

    • @ref: 20215
    • synonym: Arthrobacter cumminsii

@ref: 49504

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Pseudoglutamicibacter

species: Pseudoglutamicibacter cumminsii

type strain: no

Culture and growth conditions

culture temp

  • @ref: 49504
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 49504
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    49504C14:00.614
    49504C15:00.315
    49504C16:04.616
    49504C18:01.418
    49504C13:0 ANTEISO0.512.701
    49504C14:0 ISO2.613.618
    49504C15:0 ANTEISO41.214.711
    49504C15:0 ISO4.514.621
    49504C16:0 iso17.715.626
    49504C17:0 anteiso20.716.722
    49504C17:0 iso1.216.629
    49504C18:1 ω9c2.217.769
    49504C18:2 ω6,9c/C18:0 ANTE2.617.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
49504++++----------------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
49504--+--+--+-++--------

Isolation, sampling and environmental information

isolation

  • @ref: 49504
  • sample type: Human ear,otitis externa,82-yr-old woman
  • sampling date: 1991-09-10
  • geographic location: Borås
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Child
#Host Body-Site#Organ#Ear
#Infection#Disease
#Infection#Patient
#Host#Human#Female

External links

@ref: 49504

culture collection no.: CCUG 29118

straininfo link

  • @ref: 100621
  • straininfo: 52584

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
49504Curators of the CCUGhttps://www.ccug.se/strain?id=29118Culture Collection University of Gothenburg (CCUG) (CCUG 29118)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
100621Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID52584.1