Strain identifier

BacDive ID: 145517

Type strain: No

Species: Campylobacter coli

NCBI tax ID(s): 195 (species)

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General

@ref: 49356

BacDive-ID: 145517

keywords: Bacteria

description: Campylobacter coli CCUG 28730 is a bacterium that was isolated from Human blood,86-yr-old man,fatal infection.

NCBI tax id

  • NCBI tax id: 195
  • Matching level: species

doi: 10.13145/bacdive145517.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Campylobacteraceae
  • genus: Campylobacter
  • species: Campylobacter coli
  • full scientific name: Campylobacter coli (Doyle 1948) Véron and Chatelain 1973 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Campylobacter hyoilei
    20215Vibrio coli

@ref: 49356

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Campylobacteraceae

genus: Campylobacter

species: Campylobacter coli

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837316947citrate-assimilation
6837317272propionate-assimilation
6837317634D-glucose-assimilation
68373606565hippurate-hydrolysis
6837378019triphenyltetrazolium chloride+reduction
6837317632nitrate+reduction
6837316199urea-hydrolysis
6837325115malate-assimilation
6837330089acetate-assimilation
6837330031succinate+assimilation

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.is resistantresistance conc.
6837348923erythromycinyesyes14 µg
68373474053cefazolinyesyes224 µg
68373100147nalidixic acidyesyes84 µg

metabolite production

  • @ref: 68373
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: no

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68373L-arginine arylamidase-
68373alkaline phosphatase+3.1.3.1
68373L-aspartate arylamidase-3.4.11.21
68373pyrrolidonyl arylamidase-3.4.19.3
68373gamma-glutamyltransferase-2.3.2.2
68373esterase+
68373urease-3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    49356C14:012.414
    49356C16:035.316
    49356C12:0 ALDE ?0.910.915
    49356C14:0 3OH/C16:1 ISO I6.315.485
    49356C16:1 ω7c715.819
    49356C18:1 ω7c /12t/9t26.617.824
    49356C18:2 ω6,9c/C18:0 ANTE1.517.724
    49356C19:0 CYCLO ω8c1018.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
49356-+++-+----++--------

API CAM

@refURENITESTHIPGGTTTCPYRAArgAAspAPALH2SGLUSUTNALCFZACEPROPMLTCITERO
49356-++--+---+--+-+-----

Isolation, sampling and environmental information

isolation

  • @ref: 49356
  • sample type: Human blood,86-yr-old man,fatal infection
  • sampling date: 1991-07-05
  • geographic location: Skövde
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Disease
#Infection#Patient

External links

@ref: 49356

culture collection no.: CCUG 28730

straininfo link

  • @ref: 100510
  • straininfo: 52218

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
49356Curators of the CCUGhttps://www.ccug.se/strain?id=28730Culture Collection University of Gothenburg (CCUG) (CCUG 28730)
68373Automatically annotated from API CAM
68382Automatically annotated from API zym
100510Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID52218.1