Strain identifier

BacDive ID: 145258

Type strain: No

Species: Rodentibacter pneumotropicus

NCBI tax ID(s): 758 (species)

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General

@ref: 49057

BacDive-ID: 145258

keywords: Bacteria

description: Rodentibacter pneumotropicus CCUG 27998 is a bacterium of the family Pasteurellaceae.

NCBI tax id

  • NCBI tax id: 758
  • Matching level: species

doi: 10.13145/bacdive145258.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Rodentibacter
  • species: Rodentibacter pneumotropicus
  • full scientific name: Rodentibacter pneumotropicus (Jawetz 1950) Adhikary et al. 2017

  • synonyms

    • @ref: 20215
    • synonym: Pasteurella pneumotropica

@ref: 49057

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Rodentibacter

species: Rodentibacter pneumotropicus

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine+degradation
6837716199urea+hydrolysis
6837727897tryptophan+energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68377tryptophan deaminase+4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease+3.5.1.5
68377ornithine decarboxylase+4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    49057C12:00.312
    49057C14:024.514
    49057C16:031.416
    49057C18:0118
    49057C13:0 ISO 2OH0.513.814
    49057C14:0 3OH/C16:1 ISO I7.915.485
    49057C16:1 ω5c0.215.908
    49057C16:1 ω7c30.915.819
    49057C18:1 ω9c1.317.769
    49057C18:2 ω6,9c/C18:0 ANTE117.724
    49057Unidentified0.613.942
    49057Unidentified0.414.491
    49057Unidentified0.215.162
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
49057-+---+----++++-+----

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
49057-++++++-++-++

Isolation, sampling and environmental information

isolation

  • @ref: 49057
  • geographic location: Prague
  • country: Czechoslovakia
  • continent: Europe

External links

@ref: 49057

culture collection no.: CCUG 27998, CNCTC Papn 1/70

straininfo link

  • @ref: 100314
  • straininfo: 56160

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
49057Curators of the CCUGhttps://www.ccug.se/strain?id=27998Culture Collection University of Gothenburg (CCUG) (CCUG 27998)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
100314Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID56160.1