Strain identifier

BacDive ID: 14493

Type strain: No

Species: Staphylococcus aureus

Strain Designation: EDCC 5248

Strain history: <- T. Konradt; EDCC 5248 {2008} <- Bio-Gate GmbH <- E. Domann

NCBI tax ID(s): 1280 (species)

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General

@ref: 15827

BacDive-ID: 14493

DSM-Number: 21705

keywords: Bacteria, mesophilic, antibiotic resistance, human pathogen

description: Staphylococcus aureus EDCC 5248 is a mesophilic human pathogen that has multiple antibiotic resistances and was isolated from human oral cavity.

NCBI tax id

  • NCBI tax id: 1280
  • Matching level: species

strain history

  • @ref: 15827
  • history: <- T. Konradt; EDCC 5248 {2008} <- Bio-Gate GmbH <- E. Domann

doi: 10.13145/bacdive14493.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus aureus
  • full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Staphylococcus aureus subsp. anaerobius

@ref: 15827

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus aureus

full scientific name: Staphylococcus aureus Rosenbach 1884

strain designation: EDCC 5248

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
15827COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
15827TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

  • @ref: 15827
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

antibiogram

@refmediumPenicillin Goxacillinampicillinticarcillinmezlocillincefalotincefazolincefotaximeaztreonamimipenemtetracyclinechloramphenicolgentamycinamikacinvancomycinerythromycinlincomycinofloxacinnorfloxacincolistinpipemidic acidnitrofurantoinbacitracinpolymyxin bkanamycinneomycindoxycyclineceftriaxoneclindamycinfosfomycinmoxifloxacinlinezolidnystatinquinupristin/dalfopristinteicoplaninpiperacillin/tazobactamincubation temperatureoxygen condition
15827Mueller-Hinton Agar1001010108-10000103226-286-8202000000022206-810-1210-1232-34n.d.n.d.n.d.n.d.n.d.n.d.n.d.n.d.n.d.
15827Mueller-Hinton Agar80810108000634328222000000026206014340032124002816637aerob
15827Mueller-Hinton Agar83210101010403208302662018-20000120022-24206010-12323203012-143602816837aerob
15827Mueller-Hinton Agar80810108000634328222000000026206014340032124002816637aerob
15827Mueller-Hinton Agar83210101010403208302662018-20000120022-24206010-12323203012-143602816837aerob

observation

  • @ref: 15827
  • observation: MRSA

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837529016arginine+hydrolysis
683754853esculin-hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose+fermentation
6837517306maltose+fermentation
6837517716lactose+fermentation
6837527082trehalose+fermentation
6837516899D-mannitol+fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose+fermentation
6837559640N-acetylglucosamine+fermentation
6837532528turanose+fermentation
6837522599arabinose-fermentation

antibiotic resistance

  • @ref: 68375
  • ChEBI: 28368
  • metabolite: novobiocin
  • is antibiotic: yes
  • is resistant: yes
  • resistance conc.: 1.8 µg

enzymes

@refvalueactivityec
68375beta-glucuronidase-3.2.1.31
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375arginine dihydrolase+3.5.3.6

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
15827+++-+++++++---++--+-++++--
15827-+--+++++++---++--++++++--
15827++--+++++++---+---++/-++++--

Isolation, sampling and environmental information

isolation

  • @ref: 15827
  • sample type: human oral cavity
  • geographic location: Giessen
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Oral cavity and airways
#Host Body-Site#Oral cavity and airways#Mouth

Safety information

risk assessment

  • @ref: 15827
  • pathogenicity human: yes
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

External links

@ref: 15827

culture collection no.: DSM 21705

straininfo link

  • @ref: 83630
  • straininfo: 401086

Reference

@idauthorscataloguedoi/urltitle
15827Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21705)https://www.dsmz.de/collection/catalogue/details/culture/DSM-21705
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
68375Automatically annotated from API ID32STA
83630Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID401086.1StrainInfo: A central database for resolving microbial strain identifiers