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Strain identifier

BacDive ID: 14469

Type strain: No

Species: Staphylococcus aureus

Strain Designation: #494

Strain history: <- CCUG <- NCTC <- ATCC

NCBI tax ID(s): 1280 (species)

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For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 7597

BacDive-ID: 14469

DSM-Number: 18588

keywords: genome sequence, Bacteria, aerobe, mesophilic, human pathogen

description: Staphylococcus aureus #494 is an aerobe, mesophilic human pathogen that was isolated from Turkey salad.

NCBI tax id

  • NCBI tax id: 1280
  • Matching level: species

strain history: <- CCUG <- NCTC <- ATCC

doi: 10.13145/bacdive14469.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus aureus
  • full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Staphylococcus aureus subsp. anaerobius

@ref: 7597

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus aureus

full scientific name: Staphylococcus aureus Rosenbach 1884

strain designation: #494

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
7597COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
7597TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
7597positivegrowth37mesophilic
48296positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 48296
  • oxygen tolerance: aerobe

antibiogram

  • @ref: 7597
  • medium: Mueller-Hinton Agar
  • Penicillin G: 20
  • oxacillin: 28
  • ampicillin: 20
  • ticarcillin: 24
  • mezlocillin: 20
  • cefalotin: 32-34
  • cefazolin: 28-30
  • cefotaxime: 30
  • aztreonam: 0
  • imipenem: 48-50
  • tetracycline: 32
  • chloramphenicol: 26-28
  • gentamycin: 22
  • amikacin: 22
  • vancomycin: 20
  • erythromycin: 28-30
  • lincomycin: 28
  • ofloxacin: 26-28
  • norfloxacin: 30
  • colistin: 0
  • pipemidic acid: 10-12
  • nitrofurantoin: 20
  • bacitracin: 16
  • polymyxin b: 6-8
  • kanamycin: 32
  • neomycin: 20-22
  • doxycycline: 30
  • ceftriaxone: n.d.
  • clindamycin: n.d.
  • fosfomycin: n.d.
  • moxifloxacin: n.d.
  • linezolid: n.d.
  • nystatin: n.d.
  • quinupristin/dalfopristin: n.d.
  • teicoplanin: n.d.
  • piperacillin/tazobactam: n.d.

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837522599arabinose-fermentation
6837532528turanose+fermentation
6837559640N-acetylglucosamine+fermentation
6837517992sucrose+fermentation
6837517632nitrate+reduction
6837517057cellobiose-fermentation
6837516988D-ribose-fermentation
6837516634raffinose-fermentation
6837516899D-mannitol+fermentation
6837527082trehalose+fermentation
6837517716lactose+fermentation
6837517306maltose+fermentation
6837516024D-mannose+fermentation
6837515824D-fructose+fermentation
6837517634D-glucose+fermentation
683754853esculin-hydrolysis
6837518257ornithine-degradation
6837529016arginine+hydrolysis
6837516199urea-hydrolysis

enzymes

@refvalueactivityec
68375beta-glucuronidase-3.2.1.31
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase+3.5.3.6
68375urease-3.5.1.5

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
7597-+--+++++++---++--++++++--
7597-+--+++++++---+---+--+++--
7597-+--+++++++---++--++/--+++--
48296-+--+++++++---++--+--+++--

Isolation, sampling and environmental information

isolation

@refsample type
7597Turkey salad
48296Turkey salad

isolation source categories

Cat1Cat2Cat3
#Engineered#Food production#Food
#Host#Birds

Safety information

risk assessment

  • @ref: 7597
  • pathogenicity human: yes
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Staphylococcus aureus NCTC10656GCA_900458155contigncbi1280
66792Staphylococcus aureus strain NCTC106561280.18101wgspatric1280

External links

@ref: 7597

culture collection no.: DSM 18588, ATCC 23235, CCUG 25926, NCTC 10656

straininfo link

@refpassport
20218http://www.straininfo.net/strains/102498
20218http://www.straininfo.net/strains/144249
20218http://www.straininfo.net/strains/144252

literature

  • topic: Pathogenicity
  • Pubmed-ID: 33387272
  • title: Biomedical Applications of Mycosynthesized Selenium Nanoparticles Using Penicillium expansum ATTC 36200.
  • authors: Hashem AH, Khalil AMA, Reyad AM, Salem SS
  • journal: Biol Trace Elem Res
  • DOI: 10.1007/s12011-020-02506-z
  • year: 2021
  • mesh: Anti-Bacterial Agents/pharmacology, Humans, *Metal Nanoparticles, Microbial Sensitivity Tests, *Nanoparticles, *Penicillium, *Selenium/pharmacology, Spectroscopy, Fourier Transform Infrared

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
7597Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18588)https://www.dsmz.de/collection/catalogue/details/culture/DSM-18588
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
48296Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 25926)https://www.ccug.se/strain?id=25926
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68375Automatically annotated from API ID32STA