Strain identifier

BacDive ID: 144497

Type strain: No

Species: Staphylococcus lugdunensis

NCBI tax ID(s): 28035 (species)

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General

@ref: 48177

BacDive-ID: 144497

keywords: Bacteria

description: Staphylococcus lugdunensis CCUG 25350 is a bacterium that was isolated from Human blood,septicemia.

NCBI tax id

  • NCBI tax id: 28035
  • Matching level: species

doi: 10.13145/bacdive144497.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus lugdunensis
  • full scientific name: Staphylococcus lugdunensis Freney et al. 1988

@ref: 48177

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus lugdunensis

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837516199urea+hydrolysis
6837529016arginine-hydrolysis
6837518257ornithine+degradation
683754853esculin-hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose+fermentation
6837517306maltose+fermentation
6837517716lactose-fermentation
6837527082trehalose+fermentation
6837516899D-mannitol-fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose+fermentation
6837559640N-acetylglucosamine+fermentation
6837532528turanose-fermentation
6837522599arabinose-fermentation

antibiotic resistance

  • @ref: 68375
  • ChEBI: 28368
  • metabolite: novobiocin
  • is antibiotic: yes
  • is sensitive: yes
  • sensitivity conc.: 1.8 µg

metabolite production

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: yes

metabolite tests

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase+3.4.19.3
68375alkaline phosphatase-3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase+4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease+3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    48177C14:00.314
    48177C16:01.616
    48177C17:00.417
    48177C18:02.518
    48177C19:00.619
    48177C20:00.520
    48177C14:0 ISO213.618
    48177C15:0 ANTEISO58.614.711
    48177C15:0 ISO5.314.621
    48177C16:0 iso2.715.626
    48177C16:1 ω7c alcohol0.715.386
    48177C17:0 2OH0.818.249
    48177C17:0 anteiso1516.722
    48177C17:0 iso2.416.629
    48177C18:0 ISO0.817.632
    48177C18:2 ω6,9c/C18:0 ANTE1.517.724
    48177C19:0 ANTEISO3.218.729
    48177C19:0 ISO0.718.633
    48177Unidentified0.517.263
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
48177+-+-++++-+----++---+-++---

Isolation, sampling and environmental information

isolation

  • @ref: 48177
  • sample type: Human blood,septicemia

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood
#Infection#Inflammation
#Infection#Patient

External links

@ref: 48177

culture collection no.: CCUG 25350

straininfo link

  • @ref: 99676
  • straininfo: 57248

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
48177Curators of the CCUGhttps://www.ccug.se/strain?id=25350Culture Collection University of Gothenburg (CCUG) (CCUG 25350)
68375Automatically annotated from API ID32STA
99676Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID57248.1