Strain identifier
version 8.1 (current version)
General
@ref: 48176
BacDive-ID: 144496
keywords: Bacteria
description: Staphylococcus lugdunensis CCUG 25349 is a bacterium that was isolated from Human blood,endocarditis.
NCBI tax id
- NCBI tax id: 28035
- Matching level: species
doi: 10.13145/bacdive144496.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Staphylococcaceae
- genus: Staphylococcus
- species: Staphylococcus lugdunensis
- full scientific name: Staphylococcus lugdunensis Freney et al. 1988
@ref: 48176
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Staphylococcaceae
genus: Staphylococcus
species: Staphylococcus lugdunensis
type strain: no
Physiology and metabolism
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68375 | 16199 | urea | - | hydrolysis |
68375 | 29016 | arginine | - | hydrolysis |
68375 | 18257 | ornithine | + | degradation |
68375 | 4853 | esculin | - | hydrolysis |
68375 | 17634 | D-glucose | + | fermentation |
68375 | 15824 | D-fructose | + | fermentation |
68375 | 16024 | D-mannose | + | fermentation |
68375 | 17306 | maltose | + | fermentation |
68375 | 17716 | lactose | + | fermentation |
68375 | 27082 | trehalose | + | fermentation |
68375 | 16899 | D-mannitol | - | fermentation |
68375 | 16634 | raffinose | - | fermentation |
68375 | 16988 | D-ribose | - | fermentation |
68375 | 17057 | cellobiose | - | fermentation |
68375 | 17632 | nitrate | + | reduction |
68375 | 17992 | sucrose | + | fermentation |
68375 | 59640 | N-acetylglucosamine | + | fermentation |
68375 | 32528 | turanose | - | fermentation |
68375 | 22599 | arabinose | - | fermentation |
antibiotic resistance
- @ref: 68375
- ChEBI: 28368
- metabolite: novobiocin
- is antibiotic: yes
- is resistant: yes
- resistance conc.: 1.8 µg
metabolite production
- @ref: 68375
- Chebi-ID: 15688
- metabolite: acetoin
- production: yes
metabolite tests
- @ref: 68375
- Chebi-ID: 15688
- metabolite: acetoin
- voges-proskauer-test: +
enzymes
@ref | value | activity | ec |
---|---|---|---|
68375 | beta-glucuronidase | - | 3.2.1.31 |
68375 | pyrrolidonyl arylamidase | + | 3.4.19.3 |
68375 | alkaline phosphatase | + | 3.1.3.1 |
68375 | L-arginine arylamidase | - | |
68375 | beta-galactosidase | - | 3.2.1.23 |
68375 | beta-glucosidase | - | 3.2.1.21 |
68375 | ornithine decarboxylase | + | 4.1.1.17 |
68375 | arginine dihydrolase | - | 3.5.3.6 |
68375 | urease | - | 3.5.1.5 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 48176 C14:0 0.3 14 48176 C16:0 1.7 16 48176 C17:0 0.2 17 48176 C18:0 2.7 18 48176 C19:0 0.3 19 48176 C20:0 0.8 20 48176 C14:0 ISO 1.6 13.618 48176 C15:0 ANTEISO 54.6 14.711 48176 C15:0 ISO 4.8 14.621 48176 C16:0 3OH 0.4 17.52 48176 C16:0 iso 2.8 15.626 48176 C16:1 ω7c alcohol 0.5 15.386 48176 C17:0 anteiso 17.9 16.722 48176 C17:0 iso 2.6 16.629 48176 C18:0 ISO 0.8 17.632 48176 C18:1 ω7c /12t/9t 0.5 17.824 48176 C18:2 ω6,9c/C18:0 ANTE 1.3 17.724 48176 C19:0 ANTEISO 4 18.729 48176 C19:0 ISO 0.8 18.633 48176 C20:2 ω6,9c 0.5 19.735 48176 Unidentified 0.4 17.262 48176 Unidentified 0.7 18.233 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API ID32STA
@ref | URE | ADH Arg | ODC | ESC | GLU | FRU | MNE | MAL | LAC | TRE | MAN | RAF | RIB | CEL | NIT | VP | beta GAL | ArgA | PAL | PyrA | NOVO | SAC | NAG | TUR | ARA | beta GUR |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
48176 | - | - | + | - | + | + | + | + | + | + | - | - | - | - | + | + | - | - | + | + | + | + | + | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 48176
- sample type: Human blood,endocarditis
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | |
#Host Body Product | #Fluids | #Blood |
#Infection | #Inflammation | |
#Infection | #Patient |
External links
@ref: 48176
culture collection no.: CCUG 25349
straininfo link
- @ref: 99675
- straininfo: 57247
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
48176 | Curators of the CCUG | https://www.ccug.se/strain?id=25349 | Culture Collection University of Gothenburg (CCUG) (CCUG 25349) | |
68375 | Automatically annotated from API ID32STA | |||
99675 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID57247.1 |