Strain identifier
version 8.1 (current version)
General
@ref: 47927
BacDive-ID: 144273
keywords: genome sequence, Bacteria, microaerophile, mesophilic
description: Haemophilus haemolyticus CCUG 24149 is a microaerophile, mesophilic bacterium that was isolated from Human vagina,32-yr-old patient.
NCBI tax id
- NCBI tax id: 726
- Matching level: species
doi: 10.13145/bacdive144273.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Haemophilus
- species: Haemophilus haemolyticus
- full scientific name: Haemophilus haemolyticus Bergey et al. 1923 (Approved Lists 1980)
@ref: 47927
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Haemophilus
species: Haemophilus haemolyticus
type strain: no
Culture and growth conditions
culture temp
- @ref: 47927
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 47927
- oxygen tolerance: microaerophile
Isolation, sampling and environmental information
isolation
- @ref: 47927
- sample type: Human vagina,32-yr-old patient
- sampling date: 1989-03-13
- geographic location: Boden
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Urogenital tract | #Vagina |
| #Infection | #Patient |
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Haemophilus haemolyticus CCUG 24149 | GCA_001679135 | contig | ncbi | 726 |
| 66792 | Haemophilus haemolyticus strain CCUG 24149 | 726.57 | wgs | patric | 726 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 89.834 | no |
| flagellated | no | 95.743 | no |
| gram-positive | no | 98.027 | no |
| anaerobic | no | 90.086 | yes |
| aerobic | no | 96.737 | yes |
| halophile | no | 52.559 | no |
| spore-forming | no | 97.946 | no |
| thermophile | no | 97.584 | yes |
| glucose-util | no | 58.903 | no |
| glucose-ferment | no | 50 | no |
External links
@ref: 47927
culture collection no.: CCUG 24149
straininfo link
- @ref: 99494
- straininfo: 54385
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 47927 | Curators of the CCUG | https://www.ccug.se/strain?id=24149 | Culture Collection University of Gothenburg (CCUG) (CCUG 24149) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 99494 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID54385.1 |