Strain identifier

BacDive ID: 144262

Type strain: No

Species: Halomonas sp.

NCBI tax ID(s): 1486246 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 47903

BacDive-ID: 144262

keywords: Bacteria

description: Halomonas sp. CCUG 24023 is a bacterium that was isolated from Bicarbonate.

NCBI tax id

  • NCBI tax id: 1486246
  • Matching level: species

doi: 10.13145/bacdive144262.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Oceanospirillales
  • family: Halomonadaceae
  • genus: Halomonas
  • species: Halomonas sp.
  • full scientific name: Halomonas Vreeland et al. 1980
  • synonyms

    @refsynonym
    20215Bisbaumannia
    20215Vreelandella
    20215Onishia
    20215Franzmannia
    20215Deleya
    20215Billgrantia
    20215Litchfieldella
    20215Volcaniella

@ref: 47903

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Oceanospirillales

family: Halomonadaceae

genus: Halomonas

species: Halomonas sp.

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase+3.2.1.21

fatty acid profile

  • @reffatty acidpercentageECL
    47903C10:00.810
    47903C12:02.412
    47903C16:012.416
    47903C12:0 3OH7.113.455
    47903C16:1 ω7c17.915.819
    47903C18:1 ω7c /12t/9t55.817.824
    47903C19:0 CYCLO ω8c3.118.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG
  • @reffatty acidpercentageECL
    47903C10:00.910
    47903C12:06.412
    47903C15:01.215
    47903C16:024.616
    47903C10:0 3OH9.611.423
    47903C12:0 2OH4.413.178
    47903C16:1 ω7c46.915.819
    47903C18:1 ω7c /12t/9t6.117.824
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
47903+----+-+++-+++--+++-+

Isolation, sampling and environmental information

isolation

  • @ref: 47903
  • sample type: Bicarbonate
  • geographic location: Sens
  • country: France
  • origin.country: FRA
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Air

External links

@ref: 47903

culture collection no.: CCUG 24023

straininfo link

  • @ref: 99485
  • straininfo: 53366

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
47903Curators of the CCUGhttps://www.ccug.se/strain?id=24023Culture Collection University of Gothenburg (CCUG) (CCUG 24023)
68369Automatically annotated from API 20NE
99485Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID53366.1