Strain identifier

BacDive ID: 144252

Type strain: No

Species: Pasteurella sp.

NCBI tax ID(s): 759 (species)

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General

@ref: 47893

BacDive-ID: 144252

keywords: Bacteria

description: Pasteurella sp. CCUG 23958 is a bacterium that was isolated from Human wound,dog bite.

NCBI tax id

  • NCBI tax id: 759
  • Matching level: species

doi: 10.13145/bacdive144252.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Pasteurella
  • species: Pasteurella sp.
  • full scientific name: Pasteurella Trevisan 1887 (Approved Lists 1980)

@ref: 47893

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Pasteurella

species: Pasteurella sp.

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan+energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68377tryptophan deaminase+4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    47893C14:019.314
    47893C16:028.916
    47893C18:03.818
    47893C13:0 ISO 3OH1.314.11
    47893C14:0 3OH/C16:1 ISO I10.615.485
    47893C15:1 ISO F1.414.414
    47893C16:1 ω7c17.615.819
    47893C18:1 ω7c /12t/9t5.517.824
    47893C18:1 ω9c6.617.769
    47893C18:2 ω6,9c/C18:0 ANTE5.117.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
47893-+---+----+----+----

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
47893-++++---++--+

Isolation, sampling and environmental information

isolation

  • @ref: 47893
  • sample type: Human wound,dog bite
  • sampling date: 1989-01-01
  • geographic location: Växjö
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host#Mammals#Canidae (Dog)
#Host Body-Site#Other#Wound
#Infection#Patient

External links

@ref: 47893

culture collection no.: CCUG 23958

straininfo link

  • @ref: 99477
  • straininfo: 56037

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
47893Curators of the CCUGhttps://www.ccug.se/strain?id=23958Culture Collection University of Gothenburg (CCUG) (CCUG 23958)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
99477Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID56037.1